Detailed information of g455.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020625254.1, syntaxin-16-like isoform X3 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14662Syntaxin-16 OS=Homo sapiens OX=9606 GN=STX16 PE=1 SV=3
Q8BVI5Syntaxin-16 OS=Mus musculus OX=10090 GN=Stx16 PE=1 SV=3
Q9SUJ1Syntaxin-43 OS=Arabidopsis thaliana OX=3702 GN=SYP43 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08241Methyltransf_11Methyltransferase domainDomainInterproscan
PF17146PIN_6PIN domain of ribonucleaseDomainInterproscan
PF05739SNARESNARE domainFamilyInterproscan
PF00804SyntaxinSyntaxinDomainInterproscan
PF02181FH2Formin Homology 2 DomainFamilyInterproscan
PF00071RasRas familyDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF05118Asp_Arg_HydroxAspartyl/Asparaginyl beta-hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051422FamilyAlkB Family tRNA Methyltransferase/DioxygenaseInterproscan
IPR013216DomainMethyltransferase type 11Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR033411DomainRibonuclease, PIN domainInterproscan
IPR039907FamilyRNA-binding protein NOB1Interproscan
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR006012Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR045242FamilySyntaxinInterproscan
IPR006011DomainSyntaxin, N-terminal domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR042201Homologous_superfamilyFormin, FH2 domain superfamilyInterproscan
IPR015425DomainFormin, FH2 domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR003410DomainHYR domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR043555FamilySushi repeat-containing protein SRPX-likeInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR027443Homologous_superfamilyIsopenicillin N synthase-like superfamilyInterproscan
IPR007803DomainAspartyl/asparaginy/proline hydroxylaseInterproscan
IPR051821FamilyAspartyl/Asparaginyl beta-hydroxylase domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13069UNCHARACTERIZEDInterproscan
PTHR12814RNA-BINDING PROTEIN NOB1Interproscan
PTHR19957SYNTAXINInterproscan
PTHR45920FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM IInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47978-Interproscan
PTHR46343HYR DOMAIN-CONTAINING PROTEINInterproscan
PTHR46332ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2Interproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0048278Biological Processvesicle dockingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0030866Biological Processcortical actin cytoskeleton organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0018193Biological Processpeptidyl-amino acid modificationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23939FHOD3, FHOS2; FH1/FH2 domain-containing protein 3-Membrane traffickingko04131deepkoala
Cytoskeleton proteinsko04812deepkoala

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