Detailed information of g457.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004205690.2, histamine H2 receptor [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q627585-hydroxytryptamine receptor 4 OS=Rattus norvegicus OX=10116 GN=Htr4 PE=2 SV=1
O705285-hydroxytryptamine receptor 4 OS=Cavia porcellus OX=10141 GN=HTR4 PE=2 SV=1
Q136395-hydroxytryptamine receptor 4 OS=Homo sapiens OX=9606 GN=HTR4 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Transcription Factors Familyzf-BED

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07962Swi3Replication Fork Protection Component Swi3FamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003578FamilySmall GTPase RhoInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR052717FamilyVacuolar processing and transposase activity regulatorsInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050541FamilyLeucine-rich repeat and transmembrane domain-containing proteinInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR040038FamilyTIPIN/Csm3/Swi3Interproscan
IPR012923DomainChromosome segregation in meiosis protein 3Interproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR026687FamilyCoiled-coil domain-containing protein 181Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR24072RHO FAMILY GTPASEInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR46169DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM AInterproscan
PTHR24369ANTIGEN BSP, PUTATIVE-RELATEDInterproscan
PTHR13220TIMELESS INTERACTING-RELATEDInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR14320COILED-COIL DOMAIN-CONTAINING PROTEIN 181Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0007163Biological Processestablishment or maintenance of cell polarityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0030865Biological Processcortical cytoskeleton organizationInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0032956Biological Processregulation of actin cytoskeleton organizationInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0043652Biological Processengulfment of apoptotic cellInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0000076Biological ProcessDNA replication checkpoint signalingInterproscan
GO:0031298Cellular Componentreplication fork protection complexInterproscan
GO:0043111Biological Processreplication fork arrestInterproscan
GO:0048478Biological Processobsolete replication fork protectionInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10998TIPIN, CSM3, SWI3; replication fork protection complex subunit TIPIN/Csm3/Swi3-GTP-binding proteinsko04031deepkoala
DNA repair and recombination proteinsko03400deepkoala

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