Detailed information of g459.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3142330.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3TX08tRNA (guanine(26)-N(2))-dimethyltransferase OS=Mus musculus OX=10090 GN=Trmt1 PE=1 SV=3
Q9NXH9tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens OX=9606 GN=TRMT1 PE=1 SV=1
Q9VK89tRNA (guanine(26)-N(2))-dimethyltransferase OS=Drosophila melanogaster OX=7227 GN=Trm1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF07741BRF1Brf1-like TBP-binding domainDomainInterproscan
PF16837SF3A3Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9DomainInterproscan
PF12108SF3a60_bindingdSplicing factor SF3a60 binding domainDomainInterproscan
PF11931SF3a60_Prp9_CSF3a60/Prp9 C-terminalFamilyInterproscan
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan
PF01590GAFGAF domainDomainInterproscan
PF00233PDEase_I3'5'-cyclic nucleotide phosphodiesteraseDomainInterproscan
PF03982DAGATDiacylglycerol acyltransferase FamilyInterproscan
PF02005TRMN2,N2-dimethylguanosine tRNA methyltransferaseFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR051111FamilyCalcium-binding regulatory proteinInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011665DomainBrf1, TBP-binding domainInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR031774DomainSF3A3 domainInterproscan
IPR021966DomainSplicing factor SF3a60 binding domainInterproscan
IPR024598DomainSplicing factor SF3a60 /Prp9 subunit, C-terminalInterproscan
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR002073Domain3'5'-cyclic nucleotide phosphodiesterase, catalytic domainInterproscan
IPR023174Conserved_site3'5'-cyclic nucleotide phosphodiesterase, conserved siteInterproscan
IPR003607DomainHD/PDEase domainInterproscan
IPR003018DomainGAF domainInterproscan
IPR029016Homologous_superfamilyGAF-like domain superfamilyInterproscan
IPR023088Family3'5'-cyclic nucleotide phosphodiesteraseInterproscan
IPR036971Homologous_superfamily3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyInterproscan
IPR007130FamilyDiacylglycerol acyltransferaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR002905FamilytRNA methyltransferase, Trm1Interproscan
IPR042296Homologous_superfamilytRNA methyltransferase, Trm1, C-terminalInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR051223FamilyPolycystinInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46311CALCIUM-BINDING PROTEIN 8-RELATEDInterproscan
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan
PTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEInterproscan
PTHR12317DIACYLGLYCEROL O-ACYLTRANSFERASEInterproscan
PTHR31912IP13529PInterproscan
PTHR10631N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASEInterproscan
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0032588Cellular Componenttrans-Golgi network membraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0004114Molecular Function3',5'-cyclic-nucleotide phosphodiesterase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0004118Molecular Function3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activityInterproscan
GO:0010754Biological Processnegative regulation of cGMP-mediated signalingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008374Molecular FunctionO-acyltransferase activityInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0160102Molecular FunctiontRNA (guanine(10)-N2)-methyltransferase activityInterproscan
GO:0002940Biological ProcesstRNA N2-guanine methylationInterproscan
GO:0004809Molecular Functionobsolete tRNA (guanine-N2-)-methyltransferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12827SF3A3, SAP61, PRP9; splicing factor 3A subunit 3-Transfer RNA biogenesisko03016deepkoala
Ion channelsko04040deepkoala
Morphine addictionko05032deepkoala
Spliceosomeko03041deepkoala

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