Gene detail

Detailed information of g4615.t2 in Acropora digitifera

Genomic Location: chr2Alt:29882824...29894514
NR annotation: XP_029186049.2, degenerin unc-8-like isoform X1 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q21974	Degenerin unc-8 OS=Caenorhabditis elegans OX=6239 GN=unc-8 PE=2 SV=1
Q19038	Degenerin del-1 OS=Caenorhabditis elegans OX=6239 GN=del-1 PE=2 SV=1
P24585	Degenerin deg-1 OS=Caenorhabditis elegans OX=6239 GN=deg-1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00858 all species →	ASC	Amiloride-sensitive sodium channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001873 all species →	Family	Epithelial sodium channel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11690 all species →	AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005272 all species →	Molecular Function	sodium channel activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006814 all species →	Biological Process	sodium ion transport	Interproscan
GO:0015280 all species →	Molecular Function	ligand-gated sodium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0035725 all species →	Biological Process	sodium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04824	SCNN1A, ENACA; amiloride-sensitive sodium channel subunit alpha	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.