Genomic Location: :...
NR annotation: XP_012556415.2, histone-lysine N-methyltransferase PRDM9 isoform X2 [Hydra vulgaris]
| CDS | |||||
| g4663.t1 | |||||
| Transcript |
| g4663.t1 |
| Protein |
| g4663.t1.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-C2H2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13894 | zf-C2H2_4 | C2H2-type zinc finger | Domain | Interproscan |
| PF21549 | PRDM2_PR | PR domain zinc finger protein 2, PR domain | Domain | Interproscan |
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001214 | Domain | SET domain | Interproscan |
| IPR046341 | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR050331 | Family | Zinc finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16515 | PR DOMAIN ZINC FINGER PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K20795 | PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 | EC:2.1.1.361 | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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