Detailed information of g467.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OPJ67742.1, putative helicase senataxin [Patagioenas fasciata monilis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B6SFA4Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana OX=3702 GN=MAA3 PE=2 SV=1
Q7Z333Probable helicase senataxin OS=Homo sapiens OX=9606 GN=SETX PE=1 SV=4
Q98TR3Putative regulator of nonsense transcripts 1 OS=Takifugu rubripes OX=31033 GN=rent1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087AAA_12AAA domainDomainInterproscan
PF12726SEN1_NSEN1 N terminalFamilyInterproscan
PF04921XAP5XAP5, circadian clock regulator C-terminal domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF06608DUF1143Protein of unknown function (DUF1143)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024481DomainHelicase Sen1, N-terminalInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR007005FamilyXAP5 proteinInterproscan
IPR048337DomainFAM50A/XAP5, C-terminal domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR053231FamilyG-protein coupled receptor LN-TM7Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036716Homologous_superfamilyPesticidal crystal protein, N-terminal domain superfamilyInterproscan
IPR009524FamilyCilia- and flagella-associated protein 68Interproscan
IPR037662FamilyCilia- and flagella-associated protein 68/107Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan
PTHR12722XAP-5 PROTEIN-RELATEDInterproscan
PTHR45902LATROPHILIN RECEPTOR-LIKE PROTEIN AInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR31180UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001147Molecular Functiontranscription termination site sequence-specific DNA bindingInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0090729Molecular Functiontoxin activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10706SETX, ALS4, SEN1; ATP-dependent RNA/DNA helicase, senataxinEC:5.6.2.5
EC:5.6.2.3
Transcription machineryko03021deepkoala

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