Detailed information of g4686.t1 in Montipora capitata

Genomic Location: Sc0000088:108687...114370
NR annotation: XP_044183713.1, LOW QUALITY PROTEIN: nesprin-1-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NF91Nesprin-1 OS=Homo sapiens OX=9606 GN=SYNE1 PE=1 SV=4
Q6ZWR6Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=2
Q91ZU6Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002750 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR039906
all species →		FamilyNuclear anchorage protein 1/Nesprin-1/2-likeInterproscan
IPR001589
all species →		Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21524
all species →		SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005635
all species →		Cellular Componentnuclear envelopeInterproscan
GO:0006997
all species →		Biological Processnucleus organizationInterproscan
GO:0007010
all species →		Biological Processcytoskeleton organizationInterproscan
GO:0007097
all species →		Biological Processnuclear migrationInterproscan
GO:0019894
all species →		Molecular Functionkinesin bindingInterproscan
GO:0048471
all species →		Cellular Componentperinuclear region of cytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g4686.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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