Detailed information of g47.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: HBQ37044.1, NADH:ubiquinone reductase (Na(+)-transporting) subunit F [Paracoccaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9M2A6Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=nqrF PE=3 SV=1
Q9JVQ3Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=nqrF PE=3 SV=1
A1KSH3Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) OX=272831 GN=nqrF PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18800AtthogAttenuator of HedgehogFamilyInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF02171PiwiPiwi domainFamilyInterproscan
PF04750Far-17a_AIG1FAR-17a/AIG1-like proteinFamilyInterproscan
PF09340NuA4Histone acetyltransferase subunit NuA4FamilyInterproscan
PF00390malicMalic enzyme, N-terminal domainDomainInterproscan
PF03949Malic_MMalic enzyme, NAD binding domainDomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF21055ZSWIM4-8_CZSWIM4-8, C-terminalRepeatInterproscan
PF10277Frag1Frag1/DRAM/Sfk1 familyFamilyInterproscan
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan
PF07521RMMBLZn-dependent metallo-hydrolase RNA specificity domainMotifInterproscan
PF17770RNase_J_CRibonuclease J C-terminal domainDomainInterproscan
PF00111Fer22Fe-2S iron-sulfur cluster binding domainDomainInterproscan
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF00970FAD_binding_6Oxidoreductase FAD-binding domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037663FamilyModulator of smoothened proteinInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR003165DomainPiwi domainInterproscan
IPR006838FamilyADTRP/AIG1Interproscan
IPR015418FamilyChromatin modification-related protein Eaf6Interproscan
IPR012302DomainMalic enzyme, NAD-bindingInterproscan
IPR001891FamilyMalic oxidoreductaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR012301DomainMalic enzyme, N-terminal domainInterproscan
IPR015884Conserved_siteMalic enzyme, conserved siteInterproscan
IPR037062Homologous_superfamilyMalic enzyme, N-terminal domain superfamilyInterproscan
IPR046346Homologous_superfamilyAminoacid dehydrogenase-like, N-terminal domain superfamilyInterproscan
IPR001007DomainVWFC domainInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR048370DomainZSWIM4-8, C-terminalInterproscan
IPR050911FamilyDRAM/TMEM150 Autophagy ModulatorInterproscan
IPR019402FamilyFrag1/DRAM/Sfk1Interproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR001587Conserved_siteRibonuclease J, conserved siteInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR011108DomainZn-dependent metallo-hydrolase, RNA specificity domainInterproscan
IPR041636DomainRibonuclease J, C-terminalInterproscan
IPR042173Homologous_superfamilyRibonuclease J, domain 2Interproscan
IPR004613FamilyRibonuclease JInterproscan
IPR001041Domain2Fe-2S ferredoxin-type iron-sulfur binding domainInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR010205FamilyNa(+)-translocating NADH-quinone reductase subunit FInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR036010Homologous_superfamily2Fe-2S ferredoxin-like superfamilyInterproscan
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR008333DomainFlavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domainInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31186MODULATOR OF SMOOTHENED PROTEINInterproscan
PTHR22891EUKARYOTIC TRANSLATION INITIATION FACTOR 2CInterproscan
PTHR10989ANDROGEN-INDUCED PROTEIN 1-RELATEDInterproscan
PTHR13476UNCHARACTERIZEDInterproscan
PTHR23406MALIC ENZYME-RELATEDInterproscan
PTHR14002ENDOGLIN/TGF-BETA RECEPTOR TYPE IIIInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22619ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6Interproscan
PTHR21324FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATEDInterproscan
PTHR43694RIBONUCLEASE JInterproscan
PTHR43644NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNITInterproscan
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0045879Biological Processnegative regulation of smoothened signaling pathwayInterproscan
GO:0060170Cellular Componentciliary membraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0031047Biological Processregulatory ncRNA-mediated gene silencingInterproscan
GO:0034584Molecular FunctionpiRNA bindingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000123Cellular Componenthistone acetyltransferase complexInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0004470Molecular Functionmalic enzyme activityInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0004473Molecular Functionmalate dehydrogenase (decarboxylating) (NADP+) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006090Biological Processpyruvate metabolic processInterproscan
GO:0006108Biological Processmalate metabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031462Cellular ComponentCul2-RING ubiquitin ligase complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016655Molecular Functionoxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptorInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02156AUB, PIWI; aubergine-Enzymes with EC numbers-deepkoala
PPAR signaling pathwayko03320deepkoala
Chromosome and associated proteinsko03036deepkoala
Messenger RNA biogenesisko03019deepkoala
Chromosome and associated proteinsko03036deepkoala

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