Gene detail

Detailed information of g47.t1 in Montipora capitata

Genomic Location: Sc0000000:1116565...1135744
NR annotation: XP_015763152.1, PREDICTED: protein KIBRA-like isoform X2 [Acropora digitifera]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g47.t1

atgccaaagaagaaaacatgtgaggtgccgttgcctttaggatgggaagaggcaaaggacttcgacggtcgagtttattttatcgaccacaacacgaaaagaacttcatgggtcgatccgcgagaccggctaaccaagccaatgacatttgccgattgtgttggggatgaattaccatttggttgggaggaggtcaatgacatagttcttggaaagtattttattgatcacaatacaggtgcacaacaacttgaagacccacgcatacaatggaggcagaagagagaaaccatgttgtctgattatttagtggttgcacagtctgatttgaaggcaaagcaaaacatccttgacataaagaagcagagattggatgtggcatgtgaagaggttcagttttggacttcggagcttgagagaatgcagagacaccaggagccacacccaaagcatgtcaaacagggaagcttaagctcgtcatcatcaagttcaacggtcagctccattgctagcaaatatgacgttaaccagctgaaggtggaaatatcacaagccaagtccagggttgaaggtctcaaacaagagatggccgttgtttcgggtgaagtgcaagctcaggaagaaggatacaaaaggttaaagaaagtggacagaaagttgtcctcaaatggtggttgtaggagagaagatattccgagcttggttgaagaggtcaaaaacatgcaacgatcattatttctcaaagaacaggaaaagcaggaacttgtccaagcattgcttcgactgaaggacaacttgtctatcactaactcccatgaggtcaagggagatagtggtgaaatgaaagcaagtgctggttcacagatggatattgagtcagactcagctatcggacgttccacagaacagttcccaaaacgaaataaacaagaactgaaagctgaatacaaggacgcattgaaaaccaaatcgaagcttcagactgaaatttctcaactggacgaaagaatctctcgagctatggccgacgacaataattccaggccagggttattattggaaaaagaaactttgctcgacgaattgcggcggttgaattcacttgttcggagcgagggggaaaagcaaaaattggaagtagaaaaggacaaaatagccgcagatctggacttagctcgggaactttctcaacgtgtgatggctgacaaagctcaattacaaaccgacaaaaccaagttgattgaaaagctcacagagcaaacaagacttacctacttgctgaatatgcagctcaaaaatctgcctggtagcacaccctcagtgtcaccctgttcaagccgcgggtccctttccttatcaggaagccgtggatccctgtcagcctccagcagaggttccttaaattctcttaactaccccgacatgaatgtcagcggtgcgagtgagtcgctcaacctgcgagagctccaccaacgcgtgactgtgttgcttcaaggaatgccgcgtgacactatgacgtcaggtcagcctgtaagaacaacgggtgctgccaccagttacactttgacttctggcagagcgactcatgctagtaactcgtcgcaggtgtctctgtcttctcgggactcgatatcgctctcttcgcattcaccgcctatttctccgaatacgtgcgattattctccgacgcattcgccggcgactgctcggattacatccacggaaggagaaagtacccagagccttgatgtcacagagttggaaagaaatcctttaccgctggcggaagggattccagttcaacaaagacttcgactcttgaatgcggattcgagatcaagcgaatcgatcaacgcgattccattcattcctctatctcctatcacggaaggaatcgctgctcttcccctgcgacgctccgacgttcctctgcccccgacggggacgcggccggtcacagcggctccatcggacgaatcggttgcagctgatagcggagtcttcgacgcgtctcaggaaaacttgaaagctgctcagagcaacggcgatctgagaacaagagcggattttgaagaagatgtctcggaaacctcacaggtcaaaattggtttaacttacgatgctggaagggaagctttggtggtgtgtattgatcaagccaaaggtttgaaggcactgggcagcacgtcgccctgtaaaacgttgtatgtgaaagctgcattactgccgtgttcttcgggcgaaagctgcgtattggaaacaaaaccgtgtgattaccaggaaagcccagagtttggcgagcagtttcacatcccactggctgagggtaagctcaccaccaagacactgcaggttaatatctttgcagtcaacaattacggggtggaggagcttttgggtggagcacaagtcagcttggcggatttcaacgtccaaactcctgtgcgatttcgttggtacaaccttttgagctgcgcgttttttcactctgcggcggcgaaataccaacgcaaaagcagcgccacagcggtttcgatgagtccagtgtcagcggaaagcgcgtctgagccaaaacgtggcaactttcgacccagctcatggtgcgagggctcaaccttaagccttgagtcagcagctggatttgagcgtatgccctgtagatctgtcagccaagaggcactcaacgagccagtggagagcctacctgttcgaaaacacacctcaggaaagcctgtacaaagagcgcagtcgcaaggtgatagtgttatcagtggtggttctcttcaggatcgagacagcgacttcgatcggtctccagtggctcgatccagaccccccttggcaaagacaaagtactctcgcaagttctccgatcctcagccattgggattgtttcctcaccagggagaagaaaatgaagtgcccatgatgcctctgagccatatgtcatatgatataaacctcaaccgcagtaactccgattgcaccacgcgccaaacagatctcagtccctttgtgagattgtcagtggagcggaccagcatgagaagaaaaaagcgcccgatgtcgtggcaaggaattcaacaatatcaacaacttatccctcatctgggagaaggtagcaacagatcagcaacagccatggaccttgaatttgatcttgaagcctcgagagctaagcaggtacaagtaaacgatgaaatcaggaagttatctcaactcaagaagaggattgaggaagccatagacggtggatcgacagagatcccaaaatggcttgaggaaagtgatgaatttcaatcacttctgagagacgagggcttcagaagctggaatcctcatggttatcgcggtagaagcccgtattcgagaagaaaccagaaaacgttgagggaaaggcttaatcctcttaatccttcaaaaccaccgaagtcctctgcgaatccaaatgatagtgaacagtgggtttaa

Transcript

g47.t1

ATGCCAAAGAAGAAAACATGTGAGGTGCCGTTGCCTTTAGGATGGGAAGAGGCAAAGGACTTCGACGGTCGAGTTTATTTTATCGACCACAACACGAAAAGAACTTCATGGGTCGATCCGCGAGACCGGCTAACCAAGCCAATGACATTTGCCGATTGTGTTGGGGATGAATTACCATTTGGTTGGGAGGAGGTCAATGACATAGTTCTTGGAAAGTATTTTATTGATCACAATACagGTGCACAACAACTTGAAGACCCACGCATACAATGGAGGCAGAAGAGAGAAACCATGTTGTCTGATTATTTAGTGGTTGCACAGTCTGATTTGAAGGCAAAGCAAAACATCCTTGACATAAAGAAGCAGAGATTGGATGTGGCATGTGAAGAGGTTCAGTTTTGGACTTCGGAGCTTGAGAGAATGCAGAGACACCAGGAGCCACACCCAAAGCATGTCAAACAGGGAAGCTTAAGCTCGTCATCATCAAGTTCAACGGTCAGCTCCATTGCTAGCAAATATGACGTTAACCAGCTGAAGGTGGAAATATCACAAGCCAAGTCCAGGGTTGAAGGTCTCAAACAAGAGATGGCCGTTGTTTCGGGTGAAGTGCAAGCTCAGGAAGAAGGATACAAAAGGTTAAAGAAAGTGGACAGAAAGTTGTCCTCAAATGGTGGTTGTAGGAGAGAAGATATTCCGAGCTTGGTTGAAGAGGTCAAAAACATGCAACGATCATTATTTCTCAAAGAACAGGAAAAGCAGGAACTTGTCCAAGCATTGCTTCGACTGAAGGACAACTTGTCTATCACTAACTCCCATGAGgTCAAGGGAGATAGTGGTGAAATGAAAGCAAGTGCTGGTTCACAGATGGATATTGAGTCAGACTCAGCTATCGGACGTTCCACAGAACAGTTCCCAAAACGAAATAAACAAGAACTGAAAGCTGAATACAAGGACGCATTGAAAACCAAATCGAAGCTTCAGACTGAAATTTCTCAACTGGACGAAAGAATCTCTCGAGCTATGGCCGACGACAATAATTCCAGGCCAGGGTTATTattggaaaaagaaactttgctCGACGAATTGCGGCGGTTGAATTCACTTGTTCGGAGCGAGGGGGAAAAGCAAAAATTGGAAGTAGAAAAGGACAAAATAGCCGCAGATCTGGACTTAGCTCGGGAACTTTCTCAACGTGTGATGGCTGACAAAGCTCAATTACAAACCGACAAAACCAAGTTGATTGAAAAGCTCACAGAGCAAACAAGACTTACCTACTTGCTGAATATGCAGCTCAAAAATCTGCCTGGTAGCACACCCTCAGTGTCACCCTGTTCAAGCCGCGGGTCCCTTTCCTTATCAGGAAGCCGTGGATCCCTGTCAGCCTCCAGCAGAGGTTCCTTAAATTCTCTTAACTACCCCGACATGAATGTCAGCGGTGCGAGTGAGTCGCTCAACCTGCGAGAGCTCCACCAACGCGTGACTGTGTTGCTTCAAGGAATGCCGCGTGACACTATGACGTCAGGTCAGCCTGTAAGAACAACGGGTGCTGCCACCAGTTACACTTTGACTTCTGGCAGAGCGACTCATGCTAGTAACTCGTCGCAGGTGTCTCTGTCTTCTCGGGACTCGATATCGCTCTCTTCGCATTCACCGCCTATTTCTCCGAATACGTGCGATTATTCTCCGACGCATTCGCCGGCGACTGCTCGGATTACATCCACGGAAGGAGAAAGTACCCAGAGCCTTGATGTCACAGAGTTGGAAAGAAATCCTTTACCGCTGGCGGAAGGGATTCCAGTTCAACAAAGACTTCGACTCTTGAATGCGGATTCGAGATCAAGCGAATCGATCAACGCGATTCCATTCATTCCTCTATCTCCTATCACGGAAGGAATCGCTGCTCTTCCCCTGCGACGCTCCGACGTTCCTCTGCCCCCGACGGGGACGCGGCCGGTCACAGCGGCTCCATCGGACGAATCGGTTGCAGCTGATAGCGGAGTCTTCGACGCGTCTCAGGAAAACTTGAAAGCTGCTCAGAGCAACGGCGATCTGAGAACAAGAGCGGATTTTGAAGAAGATGTCTCGGAAACCTCACAGGTCAAAATTGGTTTAACTTACGATGCTGGAAGGGAAGCTTTGGTGGTGTGTATTGATCAAGCCAAAGGTTTGAAGGCACTGGGCAGCACGTCGCCCTGTAAAACGTTGTATGTGAAAGCTGCATTACTGCCGTGTTCTTCGGGCGAAAGCTGCGTATTGGAAACAAAACCGTGTGATTACCAGGAAAGCCCAGAGTTTGGCGAGCAGTTTCACATCCCACTGGCTGAGGGTAAGCTCACCACCAAGACACTGCAGGTTAATATCTTTGCAGTCAACAATTACGGGGTGGAGGAGCTTTTGGGTGGAGCACAAGTCAGCTTGGCGGATTTCAACGTCCAAACTCCTGTGCGATTTCGTTGGTACAACCTTTTGAGCTGCGCGTTTTTTCACTCTGCGGCGGCGAAATACCAACGCAAAAGCAGCGCCACAGCGGTTTCGATGAGTCCAGTGTCAGCGGAAAGCGCGTCTGAGCCAAAACGTGGCAACTTTCGACCCAGCTCATGGTGCGAGGGCTCAACCTTAAGCCTTGAGTCAGCAGCTGGATTTGAGCGTATGCCCTGTAGATCTGTCAGCCAAGAGGCACTCAACGAGCCAGTGGAGAGCCTACCTGTTCGAAAACACACCTCAGGAAAGCCTGTACAAAGAGCGCAGTCGCAAGGTGATAGTGTTATCAGTGGTGGTTCTCTTCAGGATCGAGACAGCGACTTCGATCGGTCTCCAGTGGCTCGATCCAGACCCCccttggcaaagacaaagtacTCTCGCAAGTTCTCCGATCCTCAGCCATTGGGATTGTTTCCTCACCAGGGAGAAGAAAATGAAGTGCCCATGATGCCTCTGAGCCATATGTCATATGATATAAACCTCAACCGCAGTAACTCCGATTGCACCACGCGCCAAACAGATCTCAGTCCCTTTGTGAGATTGTCAGTGGAGCGGACCAGCATGAGAAGAAAAAAGcGCCCGATGTCGTGGCAAGGAATTCAACAATATCAACAACTTATCCCTCATCTGGGAGAAGGTAGCAACAGATCAGCAACAGCCATGGACCTTGAATTTGATCTTGAAGCCTCGAGAGCTAAGCAGGTACAAGTAAACGATGAAATCAGGAAGTTATCTCAACTCAAGAAGAGGATTGAGGAAGCCATAGACGGTGGATCGACAGAGATCCCAAAATGGCTTGAGGAAAGTGATGAATTTCAATCACTTCTGAGAGACGAGGGCTTCAGAAGCTGGAATCCTCATGGTTATCGCGGTAGAAGCCCGTATTCGAGAAGAAACCAGAAAACGTTGAGGGAAAGGCTTAATCCTCTTAATCCTTCAAAACCACCGAAGTCCTCTGCGAATCCAAATGATAGTGAACAGTGGGTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SXA9	Protein KIBRA OS=Mus musculus OX=10090 GN=Wwc1 PE=1 SV=1
Q8IX03	Protein KIBRA OS=Homo sapiens OX=9606 GN=WWC1 PE=1 SV=1
Q6NXJ0	Protein WWC2 OS=Mus musculus OX=10090 GN=Wwc2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005390 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR051105 all species →	Family	WWC/KIBRA Hippo Pathway Regulators	Interproscan
IPR037771 all species →	Domain	WWC, C2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14791 all species →	BOMB/KIRA PROTEINS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0019900 all species →	Molecular Function	kinase binding	Interproscan
GO:0035330 all species →	Biological Process	regulation of hippo signaling	Interproscan
GO:0046621 all species →	Biological Process	negative regulation of organ growth	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16685	WWC1; protein KIBRA	-	Hippo signaling pathway - multiple species	ko04392	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.