Gene detail

Detailed information of g4762.t1 in Acropora digitifera

Genomic Location: chr2Alt:31847142...31856692
NR annotation: XP_015769082.1, PREDICTED: kelch-like protein 12 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr2Alt.g4762.t1

CTTATACACGTAAGATGGAAGCAAGGGCCAAGTTTTGCGCCCTCACTGGGGCACGCCAGATGGAACGGTGCCCCATTCGGAGAGGCAATCGCTAGATAGCTTCACTCGCTGGCGCTTATCTACGAGGAAGTCGCAAACCCAACGGGCAATTCCGCGAGGAATGCGCAAACCCAGAATTTTGGCAGCTAGAATATTATGATCTTCCAGGTCGAAGGCCTTTCTGTACAAGCACCGCTGAGCTAGTCCCTTCGGTTGCTTGCGCCCAGTTTCACTAGCAACATGGTCTCCCATTCTGAGATTCTCTTGTCGAAATGTGCTCAGTTCCGTGAGCAAGGTGAATTCACCGATGTTCGTTTAAAAGTTGGGGAGGACGAGTTTGCCGCTCATCGCATTGTTCTTGCTGCAAATAGCGATTATTTCCACGCTATGTTTACACACGGAATGAAAGAATCTAACCAGGAAGTGATCGAGCTCAAAGATAAAAACATCTCTGTTGCTGCTATGAAAATAGTGATGGATTCCATTTACAGTGGTGAGATCAATGTGAATGATGAAAATGTTTTTGAAGTATTGATTGCTGCAGATCATCTTCAAGTTGCAAGTGTTGTTCAAGAATGCTGTAAATACCTTACCCAGCTACGGTTTAATATGCAGAAATACTGCCGCGTCATCATGGTTGCTGATCAGCACAGTTTAAAGGACTTAAAAGAGGCTGCGGAAAGTAAAATAGCGTCAATGTACAAGGAAGCAGTGATGAGGTGGATCAAGTACAGGAAGGAAGAACGGATGGATGTGGCAGCTAAAGTTATTGGAGCTGTTCGTTTGGGACTGGTGGACATCTCGGATGTGATCGAGGAACTCGATACTGAGGAAATGCAGGTGATCCCAGAGATAAACATGCTGTTGCAGAGAACATTAATACACAACCACCGACCTTCGAGGAGTTCCGCGTTCGCAGTGGAGAAAGGGAAACCAAGATCAACGAGTATGGTACTGGTTGCTATTCCTCCCAAAAGTGACATGTGCTATTTTGATGTCCAGTCCAAGACATGGAAGCTGTCATCAGTGCAAAAACTACCCGATGTATTAGAATGTTATTTTGCAGAGCTTATTGGTAATTATTTATATGTTGCAGTATGTTTCTCATTGTACTGTAGTGGTATTTGTTGTTATGACATAGCTCGTGATACTTGGAGCAAACTTCCACCAATTCCTGGCACGTCACTTGGATTTTGCTCCTTGTGCCATATTGAAGACCATCTCCATGTCATTTGCACATCTGGAACATCTTACAGATATCACTTAGCTACAAATCAATGGCAAGCTGTTGCCAGCTTGAAAGATGTTTGTGACCTGAGCCAAGGAACATTTTGTAACAAAGCAGCTGCTGTGTACAAATCTTGCCCTTATGTATTGTATAGTCAAGGAAAAAATATGGGGAAAGGCTCTAAAAAGTGGTACAATTTTCATTCTCTTGTTTCTGTTCTATATTGTTTTGATCCAAAGAAAAACGTTTGGGAACAGAAAGCATCAACCAAAACTCCACACTTCGGGTCCAGTCTTTTGGTAGTAAACAATAAACTCTATGTTTTGGGGGGTTGTTGCTCACTCCAAACAACAAGTTCTGAACCACATGGCAGTCCAGCTGGTGGTCCAGCTGCCATTGAAGTTTACAATGACCAAGAAAATGCATGGTCTCTTGTAAAACAAACACACATTCCACCAAACAACCTAGGAGCAGTAGAAATTAATGGGAGGGTATATTTCATTGTCAACTCTTTCTCAGTTGACAGCGGTATTACAATCCCACCAGGGGAGGTCTACCCTGCTGTTTTGGATGGGTGGGAAAACTTGGGAATGATTGACAAAGATGTAGTTTTGTGCTATGTTCCTCTAAAAACAGAGAATCTTACAACAGAAGAAATGTTTCTTCAGAAAAAAATTTGACCACATAGGATGAATCATGCTATGTACCTGTAAAAAACAAAAAACAAAAACAGCCTAACCCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RGB8	Kelch-like protein 26 OS=Danio rerio OX=7955 GN=klhl26 PE=3 SV=1
O35709	Ectoderm-neural cortex protein 1 OS=Mus musculus OX=10090 GN=Enc1 PE=2 SV=2
O14682	Ectoderm-neural cortex protein 1 OS=Homo sapiens OX=9606 GN=ENC1 PE=1 SV=2

Gene family

Family type	Membership / link
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632 all species →	LD33804P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10442	KLHL1_4_5; kelch-like protein 1/4/5	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.