Detailed information of g478.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_031549922.1, dynein intermediate chain 2, ciliary-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q16959Dynein intermediate chain 2, ciliary OS=Heliocidaris crassispina OX=1043166 PE=2 SV=1
Q32KS2Dynein axonemal intermediate chain 1 OS=Bos taurus OX=9913 GN=DNAI1 PE=2 SV=1
Q8C0M8Dynein axonemal intermediate chain 1 OS=Mus musculus OX=10090 GN=Dnai1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00615RGSRegulator of G protein signaling domainDomainInterproscan
PF10294Methyltransf_16Lysine methyltransferaseFamilyInterproscan
PF01436NHLNHL repeatRepeatInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan
PF01532Glyco_hydro_47Glycosyl hydrolase family 47RepeatInterproscan
PF12632VezatinMysoin-binding motif of peroxisomesFamilyInterproscan
PF01762Galactosyl_TGalactosyltransferaseFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00531DeathDeath domainDomainInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF07576BRAP2BRCA1-associated protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044926Homologous_superfamilyRGS, subdomain 2Interproscan
IPR036305Homologous_superfamilyRGS domain superfamilyInterproscan
IPR016137DomainRGS domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR019410FamilyLysine methyltransferaseInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR012341Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan
IPR036026Homologous_superfamilySeven-hairpin glycosidasesInterproscan
IPR044674FamilyER degradation-enhancing alpha-mannosidase-like protein 1/2/3Interproscan
IPR001382FamilyGlycoside hydrolase family 47Interproscan
IPR026858FamilyVezatinInterproscan
IPR026859DomainMyosin-binding domainInterproscan
IPR002659FamilyGlycosyl transferase, family 31Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050687FamilyDynein Intermediate ChainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR018456Conserved_sitePTR2 family proton/oligopeptide symporter, conserved siteInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000488DomainDeath domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR047243DomainBRCA1-associated protein, RING finger, H2 subclassInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR011422DomainBRCA1-associated 2/ETP1, RRMInterproscan
IPR034932DomainBRAP2, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10845REGULATOR OF G PROTEIN SIGNALINGInterproscan
PTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENInterproscan
PTHR10680PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan
PTHR45679ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2Interproscan
PTHR15989VEZATINInterproscan
PTHR11214BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASEInterproscan
PTHR12442DYNEIN INTERMEDIATE CHAINInterproscan
PTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDInterproscan
PTHR24007BRCA1-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0004571Molecular Functionmannosyl-oligosaccharide 1,2-alpha-mannosidase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:1904380Biological Processendoplasmic reticulum mannose trimmingInterproscan
GO:1904382Biological Processmannose trimming involved in glycoprotein ERAD pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0017022Molecular Functionmyosin bindingInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0006024Biological Processglycosaminoglycan biosynthetic processInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0035250Molecular FunctionUDP-galactosyltransferase activityInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0036157Cellular Componentouter dynein armInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0045503Molecular Functiondynein light chain bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan
GO:0006857Biological Processoligopeptide transportInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0071916Molecular Functiondipeptide transmembrane transporter activityInterproscan
GO:0140206Biological Processdipeptide import across plasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11510ITGB3BP, CENPR; centromere protein R-Cytoskeleton proteinsko04812deepkoala
Ubiquitin systemko04121deepkoala
Chaperones and folding catalystsko03110deepkoala
Lectinsko04091deepkoala
Chromosome and associated proteinsko03036deepkoala

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