Detailed information of g481.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_013411498.1, GTP-binding protein Rit1 isoform X1 [Lingula anatina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P70425GTP-binding protein Rit2 OS=Mus musculus OX=10090 GN=Rit2 PE=1 SV=1
Q99578GTP-binding protein Rit2 OS=Homo sapiens OX=9606 GN=RIT2 PE=1 SV=1
Q5BJQ5GTP-binding protein Rit2 OS=Rattus norvegicus OX=10116 GN=Rit2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF05915TMEM_230_134Transmembrane proteins 230/134FamilyInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan
PF00071RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006652RepeatKelch repeat type 1Interproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR017096FamilyBTB-kelch proteinInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR053231FamilyG-protein coupled receptor LN-TM7Interproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR008590FamilyTransmembrane protein 230/134Interproscan
IPR044234FamilyTransmembrane protein 230Interproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR003496FamilyABA/WDS induced proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000859DomainCUB domainInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR000286FamilyHistone deacetylase familyInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR020849FamilySmall GTPase, Ras-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45632LD33804PInterproscan
PTHR45902LATROPHILIN RECEPTOR-LIKE PROTEIN AInterproscan
PTHR15664C20ORF30 PROTEINInterproscan
PTHR48051-Interproscan
PTHR33801ABSCISIC STRESS-RIPENING PROTEIN 5Interproscan
PTHR24039FIBRILLIN-RELATEDInterproscan
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan
PTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0019003Molecular FunctionGDP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26497TMEM230; transmembrane protein 230-GTP-binding proteinsko04031deepkoala
Membrane traffickingko04131deepkoala

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