Gene detail

Detailed information of g4823.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_027056633.1, U3 small nucleolar ribonucleoprotein protein MPP10-like [Pocillopora damicornis]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

g4823.t1

ATGCTAAAAACTTATCGGCTTACCTCTCAACGCGACCGCCATCTTGATTTTGAAGCTGTACAAGAAGAACCTGGGAATAGCTTCAATATAAACAGCATAACAAGCATGGTGGTCGCAATGGCGGACAAACGTGGTTCTTTGGAAGATCTAGAAACTTACGTTGAAGGATTTACAAAAACGTCTTACAGCCCTGAGATATATGTTGATCCTACTAAAAATCTTGCTAATAATTTATCGATTTATTTGAAAGGTGTATATGATAATACAAGATCATTAGAGCATGCTTATGACTATTCAAAATGTAATTGTCCTGTTAAAGAATTACTTGTGAGTGGTTTTGATTTAGAACAAGTCTGGCAACAAATTCAATTACAAAATGATCCTATAATCAAACATATGAAAAAgagtttgaaatatattaaacacattAAAAAGTTTTCTTTGCACGAGGTAAAAGAAAATGAAGAATTATCAGATGAATTTGAGGAGGATAGTTTTGAGACTTCAGAAAAGGAAATTTCCGATGAAAACGATATTCCCTCTAACGAAGAAGGGGACGAAAAAGTTGATAATTACAATGACGAGGACTTATCAGACGATGCAGACTTTTCAGAGGACGCAGACTTATCAGATGATATATCTgatgatgaaataaaaaacaaaacagataATGGTCGTAAATCTATGATTGatgataattttttcaaaatgtcagAAATGGAAAAATATTTAGAAGGAGAAGATAAAAAGGAACAAAGAAAATTAGATGGACTTGATGATGAGAGTGATGAAGATGAATTAGATTTATTTGGCGTCGTGGGGAGCGATGGAGAAGAAAGCGAAAGACCGTGTCCAATCTTTTCTAGTGAAGAGCCAGCTGATCCACGTTATATGAAATATAAAGAATACTTTGATCCACCCCCATCAAAAGGAAAGGATAAATCGAAACAACGCAATCAGAAGAAAACCGTTCAGAAACCAAAAGAGATTGAGAATATCATTCCAGAGGAACCAGAAGGTGATCCCGAGGAAGACCAAGAAGATGAAGATGACGAAGAAAAAGtattatcaaaacatgaacatgaacaaGCAGAGatgaaaaagaaaattgatagaCTTGAAAAAGCAAACGCAAGCGATAAACCATGGCAACTCAAAGGAGAGGCATCTGCTACACAAAGACCTGTCAACAGTCTCCTTGAAGAGTATGTTACATTTGACCACACTTCCGTTGGAGCACCAACAATAACTGAAGAAACTACAGCCTGTCTAGAAGATTTAATAAAACAGCGCATAAAGGATGAGgCTTGGGACGATGTCATACGTAAAGTCAAGCCAAATCCTGAAGAggattcaaaattcaaaaagcGAGTTGTTCTTGATCAAACAAAAAGTCAAGTTGGATTGGCAGAGATATACGAAAGAGAGTACATTAAACAAACAGAGAAAGATaaagatgaaaaagaaaaCGAAGAACACAAAGCTATCGAAAGTATGATGAAACGATTTTTCGTCAAATTAGATGCTCTATCTAACTTCCATTTTACACCCAAACCAGCGAAACCCGAACTCACTATCGTCTCGAATGTTCCATCGTTACAAGTTGAAGAAGTCATACCTGACAGCGTTACTAACGCAATGCGATTAGCACCAGAAGAGATTCATACGAAACCAATTACAGAAGAAAAGGGCGACAGTGAAAAAACGCAAACGGATAAAAACCGTGAACGTCGTAATAAGAAAGAGAGTACACGTAAGACGGAAGCGGAAAAGAAACGTAAACGTAAATTAGCCGAAATTGTTAGCGGTAAACCGGCAAAACAAAGTAAAAAGAGAGCATTAGAAACGTTAGGAAAGTCAAACAAGAACGTAATCGTAAAAGCAACGGAAGGGAAAACCGATAATAGTTTAACGTCAAGTTCAGCGTTTTTTACGAGATTACAAGAAGATGTGAAGGACAAATTAACGAAAAAGAAATTAGAAATGAAaggaaaaacatttgaaaaatcagCTAATAAGCCAGCAACTATGAAGTTATAA

Transcript

g4823.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00566	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Homo sapiens OX=9606 GN=MPHOSPH10 PE=1 SV=2
Q810V0	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Mus musculus OX=10090 GN=Mphosph10 PE=1 SV=2
Q9FJY5	M phase phosphoprotein 10 OS=Arabidopsis thaliana OX=3702 GN=MPP10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007102 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04006 all species →	Mpp10	Mpp10 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012173 all species →	Family	U3 small nucleolar ribonucleoprotein complex, subunit Mpp10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17039 all species →	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005732 all species →	Cellular Component	sno(s)RNA-containing ribonucleoprotein complex	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0034457 all species →	Cellular Component	Mpp10 complex	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14559	MPP10; U3 small nucleolar RNA-associated protein MPP10	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.