Detailed information of g483.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047144562.1, uncharacterized protein LOC100203132 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B8JI71Protein eyes shut homolog OS=Danio rerio OX=7955 GN=eys PE=1 SV=2
Q5SWD9Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1
Q5XGY1Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04950RIBIOP_C40S ribosome biogenesis protein Tsr1 and BMS1 C-terminalFamilyInterproscan
PF08142AARP2CNAARP2CN (NUC121) domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF09772Tmem26Transmembrane protein 26FamilyInterproscan
PF06565DM10_domDM10 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026205FamilyProgesterone-induced-blocking factor 1Interproscan
IPR030387DomainBms1/Tsr1-type G domainInterproscan
IPR007034DomainRibosome biogenesis protein BMS1/TSR1, C-terminalInterproscan
IPR012948DomainAARP2CNInterproscan
IPR039761FamilyRibosome biogenesis protein Bms1/Tsr1Interproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR026919FamilyAdhesion G-protein coupled receptor V1Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR025661Active_siteCysteine peptidase, asparagine active siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR019169FamilyTransmembrane protein 26Interproscan
IPR006602DomainDM10 domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR040193FamilyEF-hand domain-containing protein EFHC1/EFHC2/EFHBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18950PROGESTERONE-INDUCED BLOCKING FACTOR 1Interproscan
PTHR12858RIBOSOME BIOGENESIS PROTEINInterproscan
PTHR46682ADHESION G-PROTEIN COUPLED RECEPTOR V1Interproscan
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22168TMEM26 PROTEINInterproscan
PTHR12086EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0034451Cellular Componentcentriolar satelliteInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan
GO:0001965Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007194Biological Processnegative regulation of adenylate cyclase activityInterproscan
GO:0010855Molecular Functionadenylate cyclase inhibitor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0005930Cellular ComponentaxonemeInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0010975Biological Processregulation of neuron projection developmentInterproscan
GO:0043014Molecular Functionalpha-tubulin bindingInterproscan
GO:0060285Biological Processcilium-dependent cell motilityInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01363CTSB; cathepsin BEC:3.4.22.1
Ribosome biogenesisko03009deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala

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