Detailed information of g485.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020898402.1, tensin-1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5R9I5Aspartate--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=DARS1 PE=2 SV=1
Q3SYZ4Aspartate--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=DARS1 PE=2 SV=1
P14868Aspartate--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=DARS1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00341PDGFPDGF/VEGF domainDomainInterproscan
PF03128CXCXCCXCXC repeatRepeatInterproscan
PF00017SH2SH2 domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR023581Conserved_sitePlatelet-derived growth factor, conserved siteInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR000072DomainPDGF/VEGF domainInterproscan
IPR004153RepeatCXCXC repeatInterproscan
IPR000980DomainSH2 domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013523Homologous_superfamilyHistone acetyltransferase HAT1, C-terminalInterproscan
IPR017380FamilyHistone acetyltransferase type B, catalytic subunitInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004523FamilyAspartate-tRNA synthetase, type 2Interproscan
IPR002312FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR000998DomainMAM domainInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11633PLATELET-DERIVED GROWTH FACTORInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15832SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOGInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR12046HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNITInterproscan
PTHR43450ASPARTYL-TRNA SYNTHETASEInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0008284Biological Processpositive regulation of cell population proliferationInterproscan
GO:0031954Biological Processpositive regulation of protein autophosphorylationInterproscan
GO:0070851Molecular Functiongrowth factor receptor bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010485Molecular Functionhistone H4 acetyltransferase activityInterproscan
GO:0031509Biological Processsubtelomeric heterochromatin formationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004815Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006422Biological Processaspartyl-tRNA aminoacylationInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05449VEGFC_D; vascular endothelial growth factor C/D-Transfer RNA biogenesisko03016deepkoala
Cytokines and neuropeptidesko04052deepkoala

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