Gene detail

Detailed information of g486.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_031555326.1, uncharacterized protein LOC116292204, partial [Actinia tenebrosa]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98875	Homeobox protein Dlx1a OS=Danio rerio OX=7955 GN=dlx1a PE=2 SV=1
P56177	Homeobox protein DLX-1 OS=Homo sapiens OX=9606 GN=DLX1 PE=1 SV=3
Q64317	Homeobox protein DLX-1 OS=Mus musculus OX=10090 GN=Dlx1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000378 (this species only)
Orthogroup (gene family)	OG0000557 (this species only)
Orthogroup (gene family)	OG0000586 (this species only)
Orthogroup (gene family)	OG0001258 (this species only)
Orthogroup (gene family)	OG0002288 (this species only)
Orthogroup (gene family)	OG0003003 (this species only)
Orthogroup (gene family)	OG0005980 (this species only)
Orthogroup (gene family)	OG0006415 (this species only)
Orthogroup (gene family)	OG0006605 (this species only)
Orthogroup (gene family)	OG0006659 (this species only)
Orthogroup (gene family)	OG0008779 (this species only)
Orthogroup (gene family)	OG0012158 (this species only)
Orthogroup (gene family)	OG0014200 (this species only)
Orthogroup (gene family)	OG0015707 (this species only)
Orthogroup (gene family)	OG0080638 (this species only)
Transcription factor family	Homeobox · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21371 all species →	Apc5_N	Anaphase-promoting complex subunit 5, N-terminal domain	Domain	Interproscan
PF03083 all species →	MtN3_slv	Sugar efflux transporter for intercellular exchange	Repeat	Interproscan
PF02878 all species →	PGM_PMM_I	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I	Domain	Interproscan
PF02880 all species →	PGM_PMM_III	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	Domain	Interproscan
PF02879 all species →	PGM_PMM_II	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF01663 all species →	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF00112 all species →	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan
PF08246 all species →	Inhibitor_I29	Cathepsin propeptide inhibitor domain (I29)	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037679 all species →	Family	Anaphase-promoting complex subunit 5	Interproscan
IPR048968 all species →	Domain	Anaphase-promoting complex subunit 5, N-terminal domain	Interproscan
IPR004316 all species →	Repeat	Sugar transporter SWEET repeat	Interproscan
IPR047664 all species →	Family	Sugar transporter SWEET	Interproscan
IPR005844 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	Interproscan
IPR005846 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III	Interproscan
IPR016055 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	Interproscan
IPR036900 all species →	Homologous_superfamily	Alpha-D-phosphohexomutase, C-terminal domain superfamily	Interproscan
IPR005845 all species →	Domain	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR050125 all species →	Family	G-protein coupled receptor opsins	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR002591 all species →	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR000047 all species →	Conserved_site	Helix-turn-helix motif	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR050460 all species →	Family	Distal-less homeobox transcription factors	Interproscan
IPR020479 all species →	Domain	Homeobox domain, metazoa	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970 all species →	Conserved_site	Homeobox, conserved site	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR013201 all species →	Domain	Cathepsin propeptide inhibitor domain (I29)	Interproscan
IPR000668 all species →	Domain	Peptidase C1A, papain C-terminal	Interproscan
IPR013128 all species →	Family	Peptidase C1A	Interproscan
IPR025661 all species →	Active_site	Cysteine peptidase, asparagine active site	Interproscan
IPR000169 all species →	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR039417 all species →	Domain	Papain-like cysteine endopeptidase	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12830 all species →	ANAPHASE-PROMOTING COMPLEX SUBUNIT 5	Interproscan
PTHR16074 all species →	BARDET-BIEDL SYNDROME 7 PROTEIN	Interproscan
PTHR10791 all species →	RAG1-ACTIVATING PROTEIN 1	Interproscan
PTHR45745 all species →	PHOSPHOMANNOMUTASE 45A	Interproscan
PTHR24543 all species →	MULTICOPPER OXIDASE-RELATED	Interproscan
PTHR24240 all species →	OPSIN	Interproscan
PTHR10151 all species →	ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE	Interproscan
PTHR24327 all species →	HOMEOBOX PROTEIN	Interproscan
PTHR44103 all species →	PROPROTEIN CONVERTASE P	Interproscan
PTHR12411 all species →	CYSTEINE PROTEASE FAMILY C1-RELATED	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0045842 all species →	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan
GO:0070979 all species →	Biological Process	protein K11-linked ubiquitination	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0008104 all species →	Biological Process	protein localization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0034464 all species →	Cellular Component	BBSome	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0008643 all species →	Biological Process	carbohydrate transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0051119 all species →	Molecular Function	sugar transmembrane transporter activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016868 all species →	Molecular Function	intramolecular phosphotransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006166 all species →	Biological Process	purine ribonucleoside salvage	Interproscan
GO:0008973 all species →	Molecular Function	phosphopentomutase activity	Interproscan
GO:0071704 all species →	Biological Process	obsolete organic substance metabolic process	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01365	CTSL; cathepsin L	EC:3.4.22.15	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala
K15382	SLC50A, SWEET; solute carrier family 50 (sugar transporter)	-	Transporters	ko02000	deepkoala
K15779	PGM2; phosphoglucomutase / phosphopentomutase	EC:5.4.2.2 EC:5.4.2.7	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.