Gene detail

Detailed information of g488.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_033643407.1, uncharacterized protein LOC117303346 [Asterias rubens]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4QR80	Small ribosomal subunit protein mS25 OS=Rattus norvegicus OX=10116 GN=Mrps25 PE=2 SV=1
P82663	Small ribosomal subunit protein mS25 OS=Homo sapiens OX=9606 GN=MRPS25 PE=1 SV=1
Q9VY28	Small ribosomal subunit protein mS25 OS=Drosophila melanogaster OX=7227 GN=mRpS25 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001258 (this species only)
Orthogroup (gene family)	OG0002324 (this species only)
Orthogroup (gene family)	OG0003912 (this species only)
Orthogroup (gene family)	OG0004386 (this species only)
Orthogroup (gene family)	OG0005040 (this species only)
Orthogroup (gene family)	OG0006322 (this species only)
Orthogroup (gene family)	OG0006439 (this species only)
Orthogroup (gene family)	OG0006740 (this species only)
Orthogroup (gene family)	OG0008219 (this species only)
Orthogroup (gene family)	OG0021370 (this species only)
Orthogroup (gene family)	OG0025849 (this species only)
Orthogroup (gene family)	OG0080433 (this species only)
Orthogroup (gene family)	OG0170995 (this species only)
Orthogroup (gene family)	OG0171821 (this species only)
Orthogroup (gene family)	OG0174280 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF18829 all species →	Importin_rep_6	Importin repeat 6	Repeat	Interproscan
PF18816 all species →	Importin_rep_5	Importin repeat	Repeat	Interproscan
PF00688 all species →	TGFb_propeptide	TGF-beta propeptide	Family	Interproscan
PF00019 all species →	TGF_beta	Transforming growth factor beta like domain	Domain	Interproscan
PF05047 all species →	L51_S25_CI-B8	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	Domain	Interproscan
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan
PF00498 all species →	FHA	FHA domain	Family	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050167 all species →	Family	Serine/threonine-protein kinase	Interproscan
IPR034601 all species →	Family	Ragulator complex protein LAMTOR4	Interproscan
IPR041389 all species →	Repeat	Importin repeat 6	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR040928 all species →	Repeat	Importin repeat	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR015615 all species →	Family	Transforming growth factor-beta-related	Interproscan
IPR001111 all species →	Domain	TGF-beta, propeptide	Interproscan
IPR001839 all species →	Domain	Transforming growth factor-beta, C-terminal	Interproscan
IPR029034 all species →	Homologous_superfamily	Cystine-knot cytokine	Interproscan
IPR007741 all species →	Domain	Ribosomal protein/NADH dehydrogenase domain	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR040049 all species →	Family	Ribosomal subunit protein mS25/mL61, mitochondrial	Interproscan
IPR039253 all species →	Family	Aprataxin and PNK-like factor	Interproscan
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR043136 all species →	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR038826 all species →	Family	Coiled-coil domain-containing protein 178	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008365 all species →	Family	Prostanoid receptor	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257 all species →	SERINE-THREONINE PROTEIN KINASE	Interproscan
PTHR33967 all species →	RAGULATOR COMPLEX PROTEIN LAMTOR4	Interproscan
PTHR11848 all species →	TGF-BETA FAMILY	Interproscan
PTHR13274 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN S25	Interproscan
PTHR21315 all species →	UNCHARACTERIZED	Interproscan
PTHR35088 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 178	Interproscan
PTHR47117 all species →	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan
PTHR11866 all species →	G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0032008 all species →	Biological Process	positive regulation of TOR signaling	Interproscan
GO:0071230 all species →	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071986 all species →	Cellular Component	Ragulator complex	Interproscan
GO:0005125 all species →	Molecular Function	cytokine activity	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008083 all species →	Molecular Function	growth factor activity	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0003906 all species →	Molecular Function	DNA-(apurinic or apyrimidinic site) endonuclease activity	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0008408 all species →	Molecular Function	3'-5' exonuclease activity	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04669	TGFBRX; TGF-beta receptor, other	-	Protein kinases	ko01001	deepkoala
K17404	MRPS25; small subunit ribosomal protein S25	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.