Detailed information of g489.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029198462.2, fimbrin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9FKI0Fimbrin-5 OS=Arabidopsis thaliana OX=3702 GN=FIM5 PE=1 SV=1
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02990EMP70Endomembrane protein 70FamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF04101Glyco_tran_28_CGlycosyltransferase family 28 C-terminal domainDomainInterproscan
PF12738PTCB-BRCTtwin BRCT domainFamilyInterproscan
PF21298TopBP1_BRCT0TopBP1, BRCT0 domainDomainInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF21242ECT2_PHECT2, PH domainDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004240FamilyNonaspanin (TM9SF)Interproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR050327FamilyProton-linked Monocarboxylate TransporterInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR007235DomainGlycosyl transferase, family 28, C-terminalInterproscan
IPR039042FamilyUDP-N-acetylglucosamine transferase subunit Alg13-likeInterproscan
IPR001357DomainBRCT domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR026817FamilyGuanine nucleotide exchange factor Ect2Interproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR049542DomainDNA topoisomerase 2-binding protein 1-like, BRCT0 domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001331Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR049395DomainECT2, PH domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR039959FamilyFimbrin/PlastinInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR039808FamilyCadherinInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINInterproscan
PTHR11360MONOCARBOXYLATE TRANSPORTERInterproscan
PTHR12867GLYCOSYL TRANSFERASE-RELATEDInterproscan
PTHR16777PROTEIN ECT2Interproscan
PTHR19961FIMBRIN/PLASTINInterproscan
PTHR44464WD REPEAT-CONTAINING PROTEIN 17Interproscan
PTHR24027CADHERIN-23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0072657Biological Processprotein localization to membraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0008028Molecular Functionmonocarboxylic acid transmembrane transporter activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan
GO:0006488Biological Processdolichol-linked oligosaccharide biosynthetic processInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:2000431Biological Processregulation of cytokinesis, actomyosin contractile ring assemblyInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:0051639Biological Processactin filament network formationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07432ALG13; beta-1,4-N-acetylglucosaminyltransferaseEC:2.4.1.141
Membrane traffickingko04131deepkoala
Glycosyltransferasesko01003deepkoala

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