Detailed information of g49.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_018997412.1, methionine adenosyltransferase [Hirschia maritima]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7HZ88S-adenosylmethionine synthase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=metK PE=3 SV=1
Q2VYQ2S-adenosylmethionine synthase OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=metK PE=3 SV=1
Q13AQ6S-adenosylmethionine synthase OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=metK PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00651BTBBTB/POZ domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02772S-AdoMet_synt_MS-adenosylmethionine synthetase, central domainDomainInterproscan
PF02773S-AdoMet_synt_CS-adenosylmethionine synthetase, C-terminal domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF16043DUF4795Domain of unknown function (DUF4795)FamilyInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF17292POB3_NPOB3-like N-terminal PH domainDomainInterproscan
PF21103PH1_SSRP1-likeSSRP1 PH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000210DomainBTB/POZ domainInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR002133FamilyS-adenosylmethionine synthetaseInterproscan
IPR022631Conserved_siteS-adenosylmethionine synthetase, conserved siteInterproscan
IPR022629DomainS-adenosylmethionine synthetase, central domainInterproscan
IPR022636Homologous_superfamilyS-adenosylmethionine synthetase superfamilyInterproscan
IPR022630DomainS-adenosylmethionine synthetase, C-terminalInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR053053FamilyWD repeat-containing proteinInterproscan
IPR032013DomainDomain of unknown function DUF4795Interproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000969FamilyFACT complex subunit SSRP1/POB3Interproscan
IPR050454FamilyRTT106/SSRP1 Histone Chaperone/FACT ComplexInterproscan
IPR035417DomainFACT complex subunit SSRP1/POB3, N-terminal PH domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR048993DomainFACT complex subunit SSRP1-like, first PH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24412KELCH PROTEINInterproscan
PTHR11964S-ADENOSYLMETHIONINE SYNTHETASEInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR44566TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR47080CHROMOSOME 16 OPEN READING FRAME 96Interproscan
PTHR46780PROTEIN EVA-1Interproscan
PTHR45849FACT COMPLEX SUBUNIT SSRP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004478Molecular Functionmethionine adenosyltransferase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006556Biological ProcessS-adenosylmethionine biosynthetic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035101Cellular ComponentFACT complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:1902275Biological Processregulation of chromatin organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00789metK, MAT; S-adenosylmethionine synthetaseEC:2.5.1.6
Biosynthesis of various plant secondary metabolitesko00999deepkoala

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