Detailed information of g490.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3150845.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IY50Solute carrier family 35 member F3 OS=Homo sapiens OX=9606 GN=SLC35F3 PE=1 SV=2
Q1LZI2Solute carrier family 35 member F3 OS=Mus musculus OX=10090 GN=Slc35f3 PE=2 SV=1
Q8BZK4Solute carrier family 35 member F4 OS=Mus musculus OX=10090 GN=Slc35f4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03637Mob1_phoceinMob1/phocein familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF04494TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR005301FamilyMOB kinase activator familyInterproscan
IPR036703Homologous_superfamilyMOB kinase activator superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR049680FamilySolute carrier family 49-likeInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR003582DomainShKT domainInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR026505FamilySolute carrier family 35 member F3/F4Interproscan
IPR037264Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan
IPR007582DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan
IPR006578DomainMADF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22599MPS ONE BINDER KINASE ACTIVATOR-LIKE MOBInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10924MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATEDInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR19346UNCHARACTERIZEDInterproscan
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0051184Molecular Functionobsolete cofactor transmembrane transporter activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00444WNT5; wingless-type MMTV integration site family, member 5-Glycosaminoglycan binding proteinsko00536deepkoala

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