Gene detail

Detailed information of g4952.t1.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: KAJ7340362.1, Src kinase-associated phosphoprotein 2 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

g4952.t1

ATGGATCCAATCAACAAGGATGTTAAAGAGGCCGTGTGTGAGGCTGAGAAGTTTTTTTCTGTGACACTGGCCCAAGAAAAACTATCTCTATCAGCAGAAAAAGAACGCAGCCTGTTAGCAGATAAGTTCAGAAAGTTGAAACAACAACTTGGTTGTGAAAATGATCTCCCTGGTGGTCCCAAAGCGCCACCACGCCCACCAAAAGGAGGGATGGCCATTGCTTCTCCTGCAGCTAATGACGTCCAGGATGGAGAAGAACTGTATGATGATGTAGCAGCTGTTATCCCACAAGATGATTATTGTGAGATGGACCAAGGTGCTGAAGGAAATCAGAATCAGCCACAGGCAGTGAGTGCCAATACTGCAGGTGAAAATTATGAGGTGATGTCAGCAGAGCAGACAGATGGAGCATCACAGGGTGGTGCAGCAGCTGGGGAAGATTATATGGCAATGGAGGATGAAGGCCAAGTTCAGGAAGATTACGAAGAGCCGCAACCAGAGAAAACTGACAGTGAGAATTATGAAATTGCTGAAAGTAACATTAAACAGCCTTCAGCACAACAAGATGAGGAATACGAGGCACCCGGTGCTGATTCGGACTATGAAGAGGCAGACCGATCTACTTCAACAAATATGGCACCAGTGGAAACTGATGACATGTATGAGGGAGTCGATTCAGGCCCACAGAAACCAGAAGTGGTCAACTGGGATGATTTGACCAAGAACACTAAACCTGAGAATATTGAAGGCATTATTTTAGAAGGATTTCTCAAGAAACTCCGCAAGGAAGGCAAGATATATCTGGGGAGCAAGTACCAGAAACGCTACTGTGTGGTGCGTAATCATGTGCTCTACTACTTCAGGGAAAAGAAATCAAACAAGCAAGCCGGACATATCTTGCTGCCTGGATATAAAGCACAAGTCTGTAACAAGAAAGGACGTGAACTTAGTCTCACACATACAGGAGGACACAGATCATATCAGtttgagtGCAACTCTAAAGAGGAGGCAGATAAATGGATAAAAGCTATACAAACGGCTTGTGATGCTCCACTGTCAGAGCGGCACAGTGCTTATTTAGATGAACTCCGCGAGAAGCAACCATCAGGTGATGAGGATAGTTTGCATTACGCTGATGCAGGGCAAGCCCCTAACAACGAACCAGTGGAAGAGATGAATGATGATGTCTATGATGACACAAATGAAGATTTATATGAAGTAGTTGGCCAGTCTCCAGCCCCAAGCCAGCAGTCGCCGCCGCTGCCGCCGATACAGGACGTCGATTATGAGATATCTGCCGCAGCCTTCTCGTCACCTCCAGCATCAGCACCTGCTGAACCTGTTTCACCAATACAAGAGGAACAGTACGAGCTTCCAGAACAATCAATCCCCACATCGCCCCCCTCCCCACCTCCCCCACGACCCAGCAGACCACAACCCCAGACACCAGTGGAAGACACATCTCCAGCCGTACCACCCCCTCGTTCTTCTAAACCTCAGCCACCTGCCCCTCCCCCACCGCAACAAGATGACATGTATGAAATTGCTGATACTCCAGGCAATACCTCAGAccttcccccacccccaccgCCAGTGATAGAAGATGAAGAGTACGAAATGCCGGGAGAATCTCCCGTCCCACCCCCTATTCGTCCTCCCAGAATAGCTCAACCGTCCACTCCACTCTCGTCACATGTTCTTCAAACGGAGACGCCAGAAACTGTTCCCGAGCGACCAGCCCGACCTGCCGCTAAACAAAAACTGCCCGCTGTACCTAAACGAAAAGACGAACCGCCGCAGAGTCCCGCAGaagaacaaaagattgaaataaatTACGCTAATATATACCAAGCGCTGTGGAACTCTGAAGCAGATGATCAAGACGAGCTCGGTTTCCAACGTGGTGATCTAATCTACATTTACGAAAAGCCTCATCCTGATTGGTGGATTGGGTCCTTGTTCAGGCCTCAGGGGTACAGTGTAGGCCTGGTTCCAAAGCAGTACATGATGGAGGCGTACGAGTTATCAACATGA

Transcript

g4952.t1

Protein

Uniprot

Gene family

Uniprot term	Description
Q920G0	Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1
Q32LP7	Src kinase-associated phosphoprotein 2 OS=Bos taurus OX=9913 GN=SKAP2 PE=2 SV=1
Q5FVW6	Src kinase-associated phosphoprotein 2 OS=Xenopus tropicalis OX=8364 GN=skap2 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR037781	Family	SKAP family	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15129	SRC-ASSOCIATED ADAPTOR PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23471	SKAP2; src kinase-associated phosphoprotein 2	-	Yersinia infection	ko05135	deepkoala