Detailed information of g50.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_222491606.1, manganese-binding transcriptional regulator MntR [Maritimibacter alkaliphilus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8X7U4Transcriptional regulator MntR OS=Escherichia coli O157:H7 OX=83334 GN=mntR PE=3 SV=1
P0A9F2Transcriptional regulator MntR OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mntR PE=3 SV=1
P0A9F1Transcriptional regulator MntR OS=Escherichia coli (strain K12) OX=83333 GN=mntR PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF02742Fe_dep_repr_CIron dependent repressor, metal binding and dimerisation domainDomainInterproscan
PF01047MarRMarR familyDomainInterproscan
PF02749QRPTase_NQuinolinate phosphoribosyl transferase, N-terminal domainDomainInterproscan
PF01729QRPTase_CQuinolinate phosphoribosyl transferase, C-terminal domainDomainInterproscan
PF05679CHGNChondroitin N-acetylgalactosaminyltransferaseFamilyInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050831FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036421Homologous_superfamilyIron dependent repressor, metal binding and dimerisation domain superfamilyInterproscan
IPR001367DomainIron dependent repressor, metal binding and dimerisation domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000835DomainMarR-type HTH domainInterproscan
IPR022687DomainDTXR-type HTH domainInterproscan
IPR050536FamilyDtxR/MntR Metal-Dependent RegulatorsInterproscan
IPR022689FamilyIron dependent repressorInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027277FamilyNicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModDInterproscan
IPR036068Homologous_superfamilyNicotinate phosphoribosyltransferase-like, C-terminalInterproscan
IPR022412DomainQuinolinate phosphoribosyl transferase, N-terminalInterproscan
IPR037128Homologous_superfamilyQuinolinate phosphoribosyl transferase, N-terminal domain superfamilyInterproscan
IPR004393FamilyNicotinate-nucleotide pyrophosphorylaseInterproscan
IPR002638DomainQuinolinate phosphoribosyl transferase, C-terminalInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR008428FamilyChondroitin N-acetylgalactosaminyltransferaseInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR053751Homologous_superfamilyViral Major Capsid AssemblyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan
PTHR33238IRON (METAL) DEPENDENT REPRESSOR, DTXR FAMILYInterproscan
PTHR21559DYSTROGLYCAN-RELATEDInterproscan
PTHR32179NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING]Interproscan
PTHR18870PROTEIN TAG-278-RELATEDInterproscan
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046914Molecular Functiontransition metal ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0004514Molecular Functionnicotinate-nucleotide diphosphorylase (carboxylating) activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009435Biological ProcessNAD biosynthetic processInterproscan
GO:0034213Biological Processquinolinate catabolic processInterproscan
GO:0016763Molecular Functionpentosyltransferase activityInterproscan
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0032580Cellular ComponentGolgi cisterna membraneInterproscan
GO:0030206Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0047238Molecular Functionglucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06499CEACAM, CD66; carcinoembryonic antigen-related cell adhesion molecule-Nicotinate and nicotinamide metabolismko00760deepkoala
Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

TOP