Detailed information of g502.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_046847530.1, T-box transcription factor mls-1-like isoform X2 [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O95935T-box transcription factor TBX18 OS=Homo sapiens OX=9606 GN=TBX18 PE=1 SV=3
Q9EPZ6T-box transcription factor TBX18 OS=Mus musculus OX=10090 GN=Tbx18 PE=1 SV=1
Q96SF7T-box transcription factor TBX15 OS=Homo sapiens OX=9606 GN=TBX15 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyT-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00907T-boxT-boxDomainInterproscan
PF13202EF-hand_5EF handDomainInterproscan
PF17677Glyco_hydro38C2Glycosyl hydrolases family 38 C-terminal beta sandwich domainDomainInterproscan
PF07748Glyco_hydro_38CGlycosyl hydrolases family 38 C-terminal domainDomainInterproscan
PF09746MembralinTumour-associated proteinFamilyInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR028846FamilyRecoverin familyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR041147DomainGlycosyl hydrolases family 38, C-terminal beta sandwich domainInterproscan
IPR011682DomainGlycosyl hydrolase family 38, C-terminalInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR019144FamilyMembralinInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR050327FamilyProton-linked Monocarboxylate TransporterInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan
PTHR23055CALCIUM BINDING PROTEINSInterproscan
PTHR46017ALPHA-MANNOSIDASE 2C1Interproscan
PTHR10201MATRIX METALLOPROTEINASEInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11360MONOCARBOXYLATE TRANSPORTERInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004559Molecular Functionalpha-mannosidase activityInterproscan
GO:0009313Biological Processoligosaccharide catabolic processInterproscan
GO:0006013Biological Processmannose metabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23898RCN1; reticulocalbin-1-Peptidases and inhibitorsko01002deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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