Detailed information of g505.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCG8337100.1, 3-deoxy-7-phosphoheptulonate synthase class II [Pseudomonadota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P37822Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum OX=4113 GN=SHKB PE=2 SV=1
Q00218Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHS2 PE=2 SV=2
P37215Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum OX=4081 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08073CHDNTCHDNT (NUC034) domainDomainInterproscan
PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan
PF02894GFO_IDH_MocA_COxidoreductase family, C-terminal alpha/beta domainDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF05826Phospholip_A2_2Phospholipase A2DomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF00051KringleKringle domainDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF01474DAHP_synth_2Class-II DAHP synthetase familyDomainInterproscan
PF09107SelB-wing_3Elongation factor SelB, winged helix DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012958DomainCHD, N-terminalInterproscan
IPR000683DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR051450FamilyGfo/Idh/MocA OxidoreductasesInterproscan
IPR004104DomainGfo/Idh/MocA-like oxidoreductase, C-terminalInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR036444Homologous_superfamilyPhospholipase A2 domain superfamilyInterproscan
IPR016090DomainPhospholipase A2 domainInterproscan
IPR033113Active_sitePhospholipase A2, histidine active siteInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR000001DomainKringleInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR002480FamilyDAHP synthetase, class IIInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR004535FamilyTranslation elongation factor, selenocysteine-specificInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015191DomainElongation factor SelB, fourth winged-helix domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43377BILIVERDIN REDUCTASE AInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR12253RH14732PInterproscan
PTHR23507ZGC:174356Interproscan
PTHR21337PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2Interproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004623Molecular Functionphospholipase A2 activityInterproscan
GO:0006644Biological Processphospholipid metabolic processInterproscan
GO:0050482Biological Processarachidonate secretionInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003849Molecular Function3-deoxy-7-phosphoheptulonate synthase activityInterproscan
GO:0009073Biological Processaromatic amino acid family biosynthetic processInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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