Detailed information of g507.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBV7330432.1, homocysteine S-methyltransferase family protein [Chloroflexi bacterium TSY]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8N3S3Protein PHTF2 OS=Homo sapiens OX=9606 GN=PHTF2 PE=1 SV=2
Q5ZKN3Protein PHTF2 OS=Gallus gallus OX=9031 GN=PHTF2 PE=2 SV=1
Q9UMS5Protein PHTF1 OS=Homo sapiens OX=9606 GN=PHTF1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF02574S-methyl_transHomocysteine S-methyltransferaseFamilyInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF01434Peptidase_M41Peptidase family M41DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF12129PHTF1-2_NHomeodomain containing protein PHTF1/2, N-terminalDomainInterproscan
PF06699PIG-FGPI biosynthesis protein family Pig-FFamilyInterproscan
PF08066PMC2NTPMC2NT (NUC016) domainDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR002067FamilyMitochondrial carrier proteinInterproscan
IPR044677FamilyMitochondrial phosphate carrier protein SLC25A3/Pic2/Mir1-likeInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR036589Homologous_superfamilyHomocysteine-binding domain superfamilyInterproscan
IPR003726DomainHomocysteine-binding domainInterproscan
IPR017226FamilyBetaine-homocysteine S-methyltransferase, BHMTInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR005936FamilyATP-dependent zinc metalloprotease, FtsHInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR000642DomainPeptidase M41Interproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR037219Homologous_superfamilyPeptidase M41-likeInterproscan
IPR039775FamilyHomeodomain containing protein PHTF1/2Interproscan
IPR021980DomainPHTF1/2, N-terminalInterproscan
IPR029515FamilyLAR-interacting protein, LiprinInterproscan
IPR039930FamilyRal GTPase-activating protein subunit betaInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR009580FamilyGPI biosynthesis protein Pig-FInterproscan
IPR033060FamilyIntegrator complex subunit 7Interproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR002121DomainHRDC domainInterproscan
IPR012588DomainExosome-associated factor Rrp6, N-terminalInterproscan
IPR049559DomainRrp6-like, 3'-5' exonuclease domainInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR045092FamilyExosome complex exonuclease Rrp6-likeInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45671SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATEDInterproscan
PTHR11103SLR1189 PROTEINInterproscan
PTHR23076METALLOPROTEASE M41 FTSHInterproscan
PTHR12680PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTFInterproscan
PTHR12587LAR INTERACTING PROTEIN LIP -RELATED PROTEINInterproscan
PTHR21344UNCHARACTERIZEDInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR13322C1ORF73 PROTEINInterproscan
PTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDInterproscan
PTHR22754DISCO-INTERACTING PROTEIN 2 DIP2 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005315Molecular Functionphosphate transmembrane transporter activityInterproscan
GO:0031305Cellular Componentobsolete integral component of mitochondrial inner membraneInterproscan
GO:0035435Biological Processphosphate ion transmembrane transportInterproscan
GO:1990547Biological Processmitochondrial phosphate ion transmembrane transportInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0006515Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0048786Cellular Componentpresynaptic active zoneInterproscan
GO:0050808Biological Processsynapse organizationInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006506Biological ProcessGPI anchor biosynthetic processInterproscan
GO:0016180Biological ProcesssnRNA processingInterproscan
GO:0032039Cellular Componentintegrator complexInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000467Biological Processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0071035Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071036Biological Processnuclear polyadenylation-dependent snoRNA catabolic processInterproscan
GO:0071037Biological Processnuclear polyadenylation-dependent snRNA catabolic processInterproscan
GO:0071038Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071039Biological Processnuclear polyadenylation-dependent CUT catabolic processInterproscan
GO:0071040Biological Processnuclear polyadenylation-dependent antisense transcript catabolic processInterproscan
GO:0071044Biological Processhistone mRNA catabolic processInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05287PIGF; GPI ethanolamine phosphate transferase 2/3 subunit F-Peptidases and inhibitorsko01002deepkoala
Messenger RNA biogenesisko03019deepkoala
Exosomeko04147deepkoala
Glycosylphosphatidylinositol (GPI)-anchor biosynthesisko00563deepkoala

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