Detailed information of g508.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCP4295988.1, leucine--tRNA ligase [Pseudomonadota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B7GK53Leucine--tRNA ligase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=leuS PE=3 SV=1
C5D6D7Leucine--tRNA ligase OS=Geobacillus sp. (strain WCH70) OX=471223 GN=leuS PE=3 SV=1
Q5KW09Leucine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=leuS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14964INTS15Integrator complex subunit 15FamilyInterproscan
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan
PF12807eIF3_p135Translation initiation factor eIF3 subunit 135FamilyInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13236CLUClustered mitochondriaDomainInterproscan
PF09334tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF13603tRNA-synt_1_2Leucyl-tRNA synthetase, editing domainDomainInterproscan
PF01585G-patchG-patch domainFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00227ProteasomeProteasome subunitDomainInterproscan
PF10584Proteasome_A_NProteasome subunit A N-terminal signatureFamilyInterproscan
PF14560Ubiquitin_2Ubiquitin-like domainDomainInterproscan
PF01302CAP_GLYCAP-Gly domainDomainInterproscan
PF00255GSHPxGlutathione peroxidaseFamilyInterproscan
PF06951PLA2G12Group XII secretory phospholipase A2 precursor (PLA2G12)DomainInterproscan
PF03522SLC12Solute carrier family 12FamilyInterproscan
PF00324AA_permeaseAmino acid permeaseDomainInterproscan
PF08403AA_permease_NAmino acid permease N-terminalFamilyInterproscan
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027844FamilyIntegrator complex subunit 15Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR025697DomainCLU domainInterproscan
IPR033646DomainCLU central domainInterproscan
IPR027523FamilyCLU domain containing proteinInterproscan
IPR015413DomainMethionyl/Leucyl tRNA synthetaseInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR002302FamilyLeucine-tRNA ligaseInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR025709DomainLeucyl-tRNA synthetase, editing domainInterproscan
IPR039249FamilyG patch domain-containing protein 11Interproscan
IPR000467DomainG-patch domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR000426DomainProteasome alpha-subunit, N-terminal domainInterproscan
IPR001353FamilyProteasome, subunit alpha/betaInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR050115FamilyProteasome subunit alphaInterproscan
IPR023332FamilyProteasome alpha-type subunitInterproscan
IPR045172DomainTubulin-folding cofactor B, ubiquitin-like domainInterproscan
IPR000938DomainCAP Gly-rich domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR036859Homologous_superfamilyCAP Gly-rich domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR036444Homologous_superfamilyPhospholipase A2 domain superfamilyInterproscan
IPR010711FamilyGroup XII secretory phospholipase A2 precursorInterproscan
IPR000889FamilyGlutathione peroxidaseInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR004842FamilySLC12A transporter familyInterproscan
IPR018491DomainSLC12A transporter, C-terminalInterproscan
IPR004841DomainAmino acid permease/ SLC12A domainInterproscan
IPR013612DomainAmino acid permease, N-terminalInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR000960FamilyFlavin monooxygenase FMOInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14540UNCHARACTERIZEDInterproscan
PTHR12601EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3Interproscan
PTHR43740LEUCYL-TRNA SYNTHETASEInterproscan
PTHR21032UNCHARACTERIZEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11599PROTEASOME SUBUNIT ALPHA/BETAInterproscan
PTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGInterproscan
PTHR12824GROUP XII SECRETORY PHOSPHOLIPASE A2 FAMILY MEMBERInterproscan
PTHR11827SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERSInterproscan
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006996Biological Processorganelle organizationInterproscan
GO:0048312Biological Processintracellular distribution of mitochondriaInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004823Molecular Functionleucine-tRNA ligase activityInterproscan
GO:0006429Biological Processleucyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0019773Cellular Componentproteasome core complex, alpha-subunit complexInterproscan
GO:0005839Cellular Componentproteasome core complexInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010498Biological Processproteasomal protein catabolic processInterproscan
GO:0007021Biological Processtubulin complex assemblyInterproscan
GO:0007023Biological Processpost-chaperonin tubulin folding pathwayInterproscan
GO:0043014Molecular Functionalpha-tubulin bindingInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0004623Molecular Functionphospholipase A2 activityInterproscan
GO:0006644Biological Processphospholipid metabolic processInterproscan
GO:0050482Biological Processarachidonate secretionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016042Biological Processlipid catabolic processInterproscan
GO:0004601Molecular Functionperoxidase activityInterproscan
GO:0006979Biological Processresponse to oxidative stressInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0006884Biological Processcell volume homeostasisInterproscan
GO:0008511Molecular Functionsodium:potassium:chloride symporter activityInterproscan
GO:0015377Molecular Functionchloride:monoatomic cation symporter activityInterproscan
GO:0015379Molecular Functionpotassium:chloride symporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0055064Biological Processchloride ion homeostasisInterproscan
GO:0055075Biological Processpotassium ion homeostasisInterproscan
GO:0055078Biological Processsodium ion homeostasisInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1990573Biological Processpotassium ion import across plasma membraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02727PSMA3; 20S proteasome subunit alpha 7EC:3.4.25.1
Mitochondrial biogenesisko03029deepkoala
Exosomeko04147deepkoala
Transportersko02000deepkoala
Proteasomeko03051deepkoala

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