Detailed information of g512.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047139460.1, nuclear receptor subfamily 2 group F member 1-B isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q60632COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f1 PE=2 SV=2
P10589COUP transcription factor 1 OS=Homo sapiens OX=9606 GN=NR2F1 PE=1 SV=1
Q9TTR8COUP transcription factor 1 OS=Bos taurus OX=9913 GN=NR2F1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF04427BrixBrix domainDomainInterproscan
PF00829Ribosomal_L21pRibosomal prokaryotic L21 proteinFamilyInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR028846FamilyRecoverin familyInterproscan
IPR007109DomainBrix domainInterproscan
IPR044281FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan
IPR001787FamilyLarge ribosomal subunit protein bL21Interproscan
IPR036164Homologous_superfamilyLarge ribosomal subunit protein bL21-like superfamilyInterproscan
IPR028909FamilyLarge ribosomal subunit protein bL21-likeInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR052081FamilyDispatched hedgehog regulatorInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR004099DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR050151FamilyClass-I pyridine nucleotide-disulfide oxidoreductaseInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23055CALCIUM BINDING PROTEINSInterproscan
PTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan
PTHR46788EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5Interproscan
PTHR2134950S RIBOSOMAL PROTEIN L21Interproscan
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan
PTHR45951PROTEIN DISPATCHED-RELATEDInterproscan
PTHR22912DISULFIDE OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034457Cellular ComponentMpp10 complexInterproscan
GO:0042134Molecular FunctionrRNA primary transcript bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0004148Molecular Functiondihydrolipoyl dehydrogenase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00382DLD, lpd, pdhD; dihydrolipoyl dehydrogenaseEC:1.8.1.4
Ribosomeko03011deepkoala
Ribosome biogenesisko03009deepkoala
DNA repair and recombination proteinsko03400deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Exosomeko04147deepkoala

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