Detailed information of g515.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2647162.1, SPOR domain-containing protein [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3ZCF3S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=1 SV=1
P63209S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=2
Q5ZKF5S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01466Skp1Skp1 family, dimerisation domainDomainInterproscan
PF03931Skp1_POZSkp1 family, tetramerisation domainDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF04191PEMTPhospholipid methyltransferase FamilyInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR001232FamilyS-phase kinase-associated protein 1-likeInterproscan
IPR036296Homologous_superfamilySKP1-like, dimerisation domain superfamilyInterproscan
IPR016072DomainSKP1 component, dimerisationInterproscan
IPR016073DomainSKP1 component, POZ domainInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR016897FamilyS-phase kinase-associated protein 1Interproscan
IPR007730DomainSporulation-like domainInterproscan
IPR003582DomainShKT domainInterproscan
IPR024960FamilyPhosphatidyl-N-methylethanolamine/Phosphatidylethanolamine N-methyltransferaseInterproscan
IPR007318FamilyPhospholipid methyltransferaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR040352FamilyTransmembrane and ubiquitin-like domain-containing protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR11165SKP1Interproscan
PTHR15458PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASEInterproscan
PTHR48013DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATEDInterproscan
PTHR24049CRUMBS FAMILY MEMBERInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR14557PROTEIN C7ORF21Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan
GO:0042834Molecular Functionpeptidoglycan bindingInterproscan
GO:0006656Biological Processphosphatidylcholine biosynthetic processInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0000165Biological ProcessMAPK cascadeInterproscan
GO:0004708Molecular FunctionMAP kinase kinase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0036503Biological ProcessERAD pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23340TMUB; transmembrane and ubiquitin-like domain-containing protein-Chromosome and associated proteinsko03036deepkoala
Ion channelsko04040deepkoala
Glycerophospholipid metabolismko00564deepkoala
Ubiquitin systemko04121deepkoala

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