Detailed information of g517.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_090705865.1, MULTISPECIES: glycine cleavage system aminomethyltransferase GcvT [unclassified Beijerinckia]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14110Probable aminomethyltransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gcv1 PE=3 SV=1
Q8YNF7Aminomethyltransferase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=gcvT PE=3 SV=1
P54260Aminomethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 GN=GDCST PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF08661Rep_fac-A_3Replication factor A protein 3DomainInterproscan
PF10184DUF2358Uncharacterized conserved protein (DUF2358)FamilyInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF000037tm_37 transmembrane sweet-taste receptor of 3 GCPRDomainInterproscan
PF00757Furin-likeFurin-like cysteine rich regionDomainInterproscan
PF01030Recep_L_domainReceptor L domainRepeatInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF02487CLN3CLN3 proteinFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR003582DomainShKT domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013970FamilyReplication factor A protein 3Interproscan
IPR018790FamilyProtein of unknown function DUF2358Interproscan
IPR050726FamilyMetabotropic Glutamate ReceptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR038550Homologous_superfamilyGPCR, family 3, nine cysteines domain superfamilyInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR000162FamilyGPCR, family 3, metabotropic glutamate receptorInterproscan
IPR017978DomainGPCR family 3, C-terminalInterproscan
IPR000337FamilyGPCR, family 3Interproscan
IPR036941Homologous_superfamilyReceptor L-domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006211DomainFurin-like cysteine-rich domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR050122FamilyReceptor Tyrosine KinaseInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR000494DomainReceptor L-domainInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR006212RepeatFurin-like repeatInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan
IPR002011Conserved_siteTyrosine-protein kinase, receptor class II, conserved siteInterproscan
IPR003492FamilyBatten's disease protein Cln3Interproscan
IPR018460FamilyBatten's disease protein Cln3, subgroupInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR006223FamilyGlycine cleavage system T proteinInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46957CYTOKINE RECEPTORInterproscan
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan
PTHR21724UNCHARACTERIZEDInterproscan
PTHR15114REPLICATION PROTEIN A3Interproscan
PTHR31094RIKEN CDNA 2310061I04 GENEInterproscan
PTHR24060METABOTROPIC GLUTAMATE RECEPTORInterproscan
PTHR24416TYROSINE-PROTEIN KINASE RECEPTORInterproscan
PTHR10981BATTENINInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:1990264Biological Processpeptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activityInterproscan
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0001640Molecular Functionadenylate cyclase inhibiting G protein-coupled glutamate receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007216Biological ProcessG protein-coupled glutamate receptor signaling pathwayInterproscan
GO:0051966Biological Processregulation of synaptic transmission, glutamatergicInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004714Molecular Functiontransmembrane receptor protein tyrosine kinase activityInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0033674Biological Processpositive regulation of kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005773Cellular ComponentvacuoleInterproscan
GO:0007040Biological Processlysosome organizationInterproscan
GO:0051453Biological Processregulation of intracellular pHInterproscan
GO:0004047Molecular Functionaminomethyltransferase activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01104E3.1.3.48; protein-tyrosine phosphataseEC:3.1.3.48
One carbon pool by folateko00670deepkoala
Lysosomeko04142deepkoala
Enzymes with EC numbers-deepkoala

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