Detailed information of g518.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_029918240.1, glycine cleavage system protein GcvH [Pelobacter seleniigenes]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9WY55Glycine cleavage system H protein OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=gcvH PE=1 SV=1
A9IWV1Glycine cleavage system H protein OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=gcvH PE=3 SV=1
Q98LT7Glycine cleavage system H protein OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=gcvH PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00834Ribul_P_3_epimRibulose-phosphate 3 epimerase familyDomainInterproscan
PF01597GCV_HGlycine cleavage H-proteinDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF13906AA_permease_CC-terminus of AA_permeaseDomainInterproscan
PF13520AA_permease_2Amino acid permeaseFamilyInterproscan
PF21333FST_NFollistatin, N-terminalDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039863FamilyDickkopf related protein 1-4Interproscan
IPR000056FamilyRibulose-phosphate 3-epimerase-likeInterproscan
IPR011060Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR002930FamilyGlycine cleavage system H-proteinInterproscan
IPR003016Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR017453FamilyGlycine cleavage system H-protein, subgroupInterproscan
IPR033753FamilyGlycine cleavage system H-protein/SimiateInterproscan
IPR000089DomainBiotin/lipoyl attachmentInterproscan
IPR011053Homologous_superfamilySingle hybrid motifInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR024940FamilyTranscription factor TCF/LEFInterproscan
IPR029485DomainCationic amino acid transporter, C-terminalInterproscan
IPR002293FamilyAmino acid/polyamine transporter IInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR036773Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12113DICKKOPF3-LIKE 3Interproscan
PTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINInterproscan
PTHR10373TRANSCRIPTION FACTOR 7 FAMILY MEMBERInterproscan
PTHR43243INNER MEMBRANE TRANSPORTER YGJI-RELATEDInterproscan
PTHR13866SPARC OSTEONECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0039706Molecular Functionco-receptor bindingInterproscan
GO:0048019Molecular Functionreceptor antagonist activityInterproscan
GO:0090090Biological Processnegative regulation of canonical Wnt signaling pathwayInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016857Molecular Functionracemase and epimerase activity, acting on carbohydrates and derivativesInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009249Biological Processprotein lipoylationInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan
GO:1990907Cellular Componentbeta-catenin-TCF complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006865Biological Processamino acid transportInterproscan
GO:0015171Molecular Functionamino acid transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005518Molecular Functioncollagen bindingInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13865SLC7A3, ATRC3; solute carrier family 7 (cationic amino acid transporter), member 3-Lipoic acid metabolismko00785deepkoala
Transportersko02000deepkoala

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