Detailed information of g5190.t1 in Acropora digitifera

Genomic Location: chr3Alt:73474...110745
NR annotation: XP_015763013.1, PREDICTED: fibrocystin-L-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86WI1Fibrocystin-L OS=Homo sapiens OX=9606 GN=PKHD1L1 PE=1 SV=2
Q80ZA4Fibrocystin-L OS=Mus musculus OX=10090 GN=Pkhd1l1 PE=1 SV=1
E2RK30Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01833
all species →		TIGIPT/TIG domainDomainInterproscan
PF10162
all species →		G8G8 domainDomainInterproscan
PF00028
all species →		CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR002909
all species →		DomainIPT domainInterproscan
IPR036439
all species →		Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR002893
all species →		DomainZinc finger, MYND-typeInterproscan
IPR011050
all species →		Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR002126
all species →		DomainCadherin-likeInterproscan
IPR015919
all species →		Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894
all species →		Conserved_siteCadherin conserved siteInterproscan
IPR019316
all species →		DomainG8 domainInterproscan
IPR052387
all species →		FamilyFibrocystin-related proteinInterproscan
IPR006626
all species →		RepeatParallel beta-helix repeatInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR012334
all species →		Homologous_superfamilyPectin lyase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46769
all species →		POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000272
all species →		Biological Processpolysaccharide catabolic processInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →		Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K27624PKHD1L1; fibrocystin-L-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP