Genomic Location: scaffold_2:14461373...14536940
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families
| CDS |
| g5200.t1 |
| Transcript |
| g5200.t1 |
| Protein |
| g5200.t1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003116 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13445 all species → | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| PF00567 all species → | TUDOR | Tudor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035437 all species → | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR002999 all species → | Domain | Tudor domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR039117 all species → | Family | RING finger protein 17 | Interproscan |
| IPR027370 all species → | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16442 all species → | RING FINGER PROTEIN 17 | Interproscan |
g5200.t1 in Tripedalia maipoensis.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18405 | TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7 | - | Chromosome and associated proteins | ko03036 | deepkoala |
