Detailed information of g5200.t2 in Tripedalia maipoensis

Genomic Location: scaffold_2:14462573...14536940
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445
all species →		zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00567
all species →		TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR039117
all species →		FamilyRING finger protein 17Interproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027370
all species →		DomainZinc finger, RING-type, eukaryoticInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16442
all species →		RING FINGER PROTEIN 17Interproscan

 Gene Ontology
No Gene Ontology signature was detected for g5200.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18405TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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