Detailed information of g521.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCH9758355.1, aminomethyltransferase family protein [Pseudomonadota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5LT52Trimethylamine-oxide aldolase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=tdm PE=1 SV=2
A7GSN8Aminomethyltransferase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) OX=315749 GN=gcvT PE=3 SV=1
A8FF41Aminomethyltransferase OS=Bacillus pumilus (strain SAFR-032) OX=315750 GN=gcvT PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00077RVPRetroviral aspartyl proteaseDomainInterproscan
PF01066CDP-OH_P_transfCDP-alcohol phosphatidyltransferaseFamilyInterproscan
PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane componentFamilyInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF09347DUF1989Domain of unknown function (DUF1989)DomainInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF07929PRiA4_ORF3Plasmid pRiA4b ORF-3-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR018061DomainRetropepsinsInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR000462FamilyCDP-alcohol phosphatidyltransferaseInterproscan
IPR043130Homologous_superfamilyCDP-alcohol phosphatidyltransferase, transmembrane domainInterproscan
IPR050324FamilyCDP-alcohol phosphatidyltransferase class-IInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR018959DomainDomain of unknown function DUF1989Interproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR035906Homologous_superfamilyMetI-like superfamilyInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR050122FamilyReceptor Tyrosine KinaseInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR036849Homologous_superfamilyEnolase-like, C-terminal domain superfamilyInterproscan
IPR024047Homologous_superfamilyMM3350-like superfamilyInterproscan
IPR012912FamilyPlasmid pRiA4b, Orf3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan
PTHR14269CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATEDInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan
PTHR24416TYROSINE-PROTEIN KINASE RECEPTORInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR41878LEXA REPRESSOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008654Biological Processphospholipid biosynthetic processInterproscan
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groupsInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0032049Biological Processcardiolipin biosynthetic processInterproscan
GO:0043337Molecular Functioncardiolipin synthase (CMP-forming)Interproscan
GO:0046474Biological Processglycerophospholipid biosynthetic processInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004714Molecular Functiontransmembrane receptor protein tyrosine kinase activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007169Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0033674Biological Processpositive regulation of kinase activityInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05127PTK7, CCK4; PTK7 protein tyrosine kinase 7EC:2.7.10.1
Exosomeko04147deepkoala

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