Detailed information of g5225.t1 in Acropora digitifera

Genomic Location: chr3Alt:643083...645960
NR annotation: XP_015771151.1, PREDICTED: collagen alpha-1(XII) chain-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P12109Collagen alpha-1(VI) chain OS=Homo sapiens OX=9606 GN=COL6A1 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525
all species →		FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →		COLLAGEN ALPHAInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g5225.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g5225.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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