Gene detail

Detailed information of g5227.t1 in Acropora digitifera

Genomic Location: chr3Alt:669931...672502
NR annotation: XP_015771148.1, PREDICTED: ankyrin repeat domain-containing protein 53-like isoform X1 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BQI6	SMC5-SMC6 complex localization factor protein 1 OS=Homo sapiens OX=9606 GN=SLF1 PE=1 SV=2
A6QR20	SMC5-SMC6 complex localization factor protein 1 OS=Bos taurus OX=9913 GN=SLF1 PE=2 SV=2
Q8N9B4	Ankyrin repeat domain-containing protein 42 OS=Homo sapiens OX=9606 GN=ANKRD42 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13637 all species →	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR042335 all species →	Family	Ankyrin repeat domain-containing protein 53	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24160 all species →	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0007080 all species →	Biological Process	mitotic metaphase chromosome alignment	Interproscan
GO:0031116 all species →	Biological Process	positive regulation of microtubule polymerization	Interproscan
GO:0060236 all species →	Biological Process	regulation of mitotic spindle organization	Interproscan
GO:1902412 all species →	Biological Process	regulation of mitotic cytokinesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21441	ANKRD53; ankyrin repeat domain-containing protein 53	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.