Detailed information of g523.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCH9705806.1, glycine/betaine ABC transporter substrate-binding protein [Pseudomonadota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9BVG4Protein PBDC1 OS=Homo sapiens OX=9606 GN=PBDC1 PE=1 SV=1
Q9D0B6Protein PBDC1 OS=Mus musculus OX=10090 GN=Pbdc1 PE=1 SV=1
A0A481NSZ4Bactericidal permeability-increasing protein OS=Sebastes schlegelii OX=214486 GN=BPI PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01273LBP_BPI_CETPLBP / BPI / CETP family, N-terminal domainFamilyInterproscan
PF04069OpuACSubstrate binding domain of ABC-type glycine betaine transport systemFamilyInterproscan
PF01526DDE_Tnp_Tn3Tn3 transposase DDE domainDomainInterproscan
PF13700DUF4158Domain of unknown function (DUF4158)DomainInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan
PF04669PBDC1PBDC1 proteinDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR045897FamilyLipid binding protein BPI/LBP, plantsInterproscan
IPR017942DomainLipid-binding serum glycoprotein, N-terminalInterproscan
IPR017943Homologous_superfamilyBactericidal permeability-increasing protein, alpha/beta domain superfamilyInterproscan
IPR007210DomainABC-type glycine betaine transport system, substrate-binding domainInterproscan
IPR002513DomainTn3 transposase DDE domainInterproscan
IPR047653FamilyTn3-like transposaseInterproscan
IPR025296DomainDomain of unknown function DUF4158Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036438Homologous_superfamilyInsulin-like superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR052859FamilyLeucine-rich repeat and IQ domain-containing proteinInterproscan
IPR023139Homologous_superfamilyPBDC1-like domain superfamilyInterproscan
IPR008476FamilyProtein PBDC1, metazoa/fungiInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635CUB DOMAIN-CONTAINING PROTEINInterproscan
PTHR46801OS06G0309200 PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46723LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3Interproscan
PTHR13410PROTEIN PBDC1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0043190Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004803Molecular Functiontransposase activityInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00161PDHA, pdhA; pyruvate dehydrogenase E1 component subunit alphaEC:1.2.4.1
Diabetic cardiomyopathyko05415deepkoala

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