Detailed information of g53.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012556964.2, serine/arginine repetitive matrix protein 1 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZMJ9Serine/arginine repetitive matrix protein 1 OS=Gallus gallus OX=9031 GN=SRRM1 PE=2 SV=1
Q8IYB3Serine/arginine repetitive matrix protein 1 OS=Homo sapiens OX=9606 GN=SRRM1 PE=1 SV=2
Q5R5Q2Serine/arginine repetitive matrix protein 1 OS=Pongo abelii OX=9601 GN=SRRM1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071RasRas familyDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02121IP_transPhosphatidylinositol transfer proteinFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF13472Lipase_GDSL_2GDSL-like Lipase/Acylhydrolase familyDomainInterproscan
PF01480PWIPWI domainFamilyInterproscan
PF16275SF1-HHSplicing factor 1 helix-hairpin domainDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001806FamilySmall GTPaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051226FamilyProtein Phosphatase 1 Regulatory SubunitInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001666FamilyPhosphatidylinositol transfer proteinInterproscan
IPR023393Homologous_superfamilySTART-like domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR036483Homologous_superfamilyPWI domain superfamilyInterproscan
IPR036514Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR052225FamilySerine/arginine repetitive matrixInterproscan
IPR013830DomainSGNH hydrolase-type esterase domainInterproscan
IPR002483DomainPWI domainInterproscan
IPR032570DomainSplicing factor 1, helix-hairpin domainInterproscan
IPR047086Homologous_superfamilySplicing factor 1, helix-hairpin domain superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR045071FamilyKH domain-containing BBP-likeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47978-Interproscan
PTHR24179PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12Interproscan
PTHR16148NF-KAPPA-B-REPRESSING FACTOR-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10658PHOSPHATIDYLINOSITOL TRANSFER PROTEINInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINInterproscan
PTHR11208RNA-BINDING PROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004857Molecular Functionenzyme inhibitor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019208Molecular Functionphosphatase regulator activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005548Molecular Functionphospholipid transporter activityInterproscan
GO:0008526Molecular Functionphosphatidylinositol transfer activityInterproscan
GO:0015914Biological Processphospholipid transportInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03938NDUFS5; NADH dehydrogenase (ubiquinone) Fe-S protein 5-GTP-binding proteinsko04031deepkoala
Non-alcoholic fatty liver diseaseko04932deepkoala

TOP