Genomic Location: scaffold_1:4199667...4253215
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families
| CDS |
| g53.t1 |
| Transcript |
| g53.t1 |
| Protein |
| g53.t1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20826 all species → | PHD_5 | PhD finger domain | Domain | Interproscan |
| PF11717 all species → | Tudor-knot | RNA binding activity-knot of a chromodomain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019786 all species → | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR016197 all species → | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR043449 all species → | Family | PHD finger protein 20-like | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR025995 all species → | Domain | RNA binding activity-knot of a chromodomain | Interproscan |
| IPR002999 all species → | Domain | Tudor domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15856 all species → | PHD FINGER PROTEIN 20-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0016573 all species → | Biological Process | obsolete histone acetylation | Interproscan |
| GO:0044545 all species → | Cellular Component | NSL complex | Interproscan |
g53.t1.
