Gene detail

Detailed information of g530.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: OGG96460.1, acetyl-CoA carboxylase carboxyltransferase subunit alpha [Candidatus Lambdaproteobacteria bacterium RIFOXYD12_FULL_49_8]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B8GQ68	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=accA PE=3 SV=1
Q9K842	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=accA PE=3 SV=1
A3N2D4	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=accA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03255	ACCA	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit	Family	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF14714	KH_dom-like	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF05380	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan
PF10501	Ribosomal_L50	Ribosomal subunit 39S	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001095	Family	Acetyl-CoA carboxylase, alpha subunit	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR011763	Domain	Acetyl-coenzyme A carboxyltransferase, C-terminal	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR031166	Domain	EngA-type guanine nucleotide-binding (G) domain	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR016484	Family	GTPase Der	Interproscan
IPR015946	Homologous_superfamily	K homology domain-like, alpha/beta	Interproscan
IPR032859	Domain	GTPase Der, C-terminal KH-domain-like	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR008042	Family	Retrotransposon, Pao	Interproscan
IPR018305	Family	Large ribosomal subunit protein mL50	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42853	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43834	GTPASE DER	Interproscan
PTHR44523	TETRATRICOPEPTIDE REPEAT PROTEIN 13	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003989	Molecular Function	acetyl-CoA carboxylase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0009317	Cellular Component	acetyl-CoA carboxylase complex	Interproscan
GO:0016743	Molecular Function	carboxyl- or carbamoyltransferase activity	Interproscan
GO:0016874	Molecular Function	ligase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03977	engA, der; GTPase	-	Fatty acid biosynthesis	ko00061	deepkoala
K03977	engA, der; GTPase	-	Ribosome biogenesis	ko03009	deepkoala