Gene detail

Detailed information of g5311.t1.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3045405.1, unnamed protein product [Porites lobata]
Species abbreviation DCRIB · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6H8Y1	Transcription factor TFIIIB component B'' homolog OS=Homo sapiens OX=9606 GN=BDP1 PE=1 SV=3
Q571C7	Transcription factor TFIIIB component B'' homolog OS=Mus musculus OX=10090 GN=Bdp1 PE=2 SV=2
O94481	Transcription factor TFIIIB component B'' OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bdp1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005753 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15963 all species →	Myb_DNA-bind_7	Myb DNA-binding like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039467 all species →	Domain	Transcription factor TFIIIB component B'', Myb domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22929 all species →	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000126 all species →	Cellular Component	transcription factor TFIIIB complex	Interproscan
GO:0001156 all species →	Molecular Function	TFIIIC-class transcription factor complex binding	Interproscan
GO:0070898 all species →	Biological Process	RNA polymerase III preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15198	BDP1, TFC5; transcription factor TFIIIB component B''	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.