Detailed information of g532.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBC8460670.1, YbjN domain-containing protein [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q60BG8Cysteine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=cysS PE=3 SV=1
Q3A8C9Cysteine--tRNA ligase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=cysS PE=3 SV=1
A0L4P8Cysteine--tRNA ligase OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=cysS PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC
Ubiquitin FamilyUBD|UBC-like|UEV
Ubiquitin FamilyE2|UEV|UEV

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04419SERF-like_NSmall EDRK-rich factor 1/2-like, N-terminalDisorderedInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF01909NTP_transf_2Nucleotidyltransferase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF03828PAP_assocCid1 family poly A polymeraseFamilyInterproscan
PF01406tRNA-synt_1etRNA synthetases class I (C) catalytic domainFamilyInterproscan
PF02348CTP_transf_3CytidylyltransferaseFamilyInterproscan
PF09190DALR_2DALR domainDomainInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045230FamilyZinc finger protein MBS1/2-likeInterproscan
IPR007513DomainSmall EDRK-rich factor-like, N-terminalInterproscan
IPR026939Homologous_superfamilyZNF706/At2g23090 superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR044712FamilyNAD/FAD transporter SLC25A32-likeInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR002934DomainPolymerase, nucleotidyl transferase domainInterproscan
IPR002058DomainPAP/25A-associatedInterproscan
IPR024909FamilyCysteinyl-tRNA synthetase/mycothiol ligaseInterproscan
IPR015273DomainCysteinyl-tRNA synthetase, class Ia, DALRInterproscan
IPR032678DomaintRNA synthetases class I, catalytic domainInterproscan
IPR003329FamilyAcylneuraminate cytidylyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR004528Family3-deoxy-D-manno-octulosonate cytidylyltransferaseInterproscan
IPR015803FamilyCysteine-tRNA ligaseInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR023313Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR050113FamilyUbiquitin-conjugating enzymeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21213GEO09665P1-RELATEDInterproscan
PTHR45683MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATEDInterproscan
PTHR12271POLY A POLYMERASE CID PAP -RELATEDInterproscan
PTHR10890CYSTEINYL-TRNA SYNTHETASEInterproscan
PTHR24067UBIQUITIN-CONJUGATING ENZYME E2Interproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006862Biological Processnucleotide transportInterproscan
GO:0008517Molecular Functionfolic acid transmembrane transporter activityInterproscan
GO:0015230Molecular FunctionFAD transmembrane transporter activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:1904947Biological Processfolate import into mitochondrionInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan
GO:0050265Molecular FunctionRNA uridylyltransferase activityInterproscan
GO:0071076Biological ProcessRNA 3' uridylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004817Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006423Biological Processcysteinyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0008690Molecular Function3-deoxy-manno-octulosonate cytidylyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13291TUT; terminal uridylyltransferaseEC:2.7.7.52
Ubiquitin systemko04121deepkoala
Transportersko02000deepkoala
Enzymes with EC numbers-deepkoala

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