Gene detail

Detailed information of g534.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_222221504.1, glutathione-disulfide reductase [Marinobacterium arenosum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P23189	Glutathione reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=gor PE=3 SV=1
P80461	Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 GN=GOR PE=1 SV=1
P42770	Glutathione reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2360 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF00919	UPF0004	Uncharacterized protein family UPF0004	Family	Interproscan
PF05270	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan
PF02852	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF02494	HYR	HYR domain	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050410	Family	CCR4/nocturin mRNA turnover and transcription	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR020612	Conserved_site	Methylthiotransferase, conserved site	Interproscan
IPR013848	Domain	Methylthiotransferase, N-terminal	Interproscan
IPR038135	Homologous_superfamily	Methylthiotransferase, N-terminal domain superfamily	Interproscan
IPR005839	Family	Methylthiotransferase	Interproscan
IPR023404	Homologous_superfamily	Radical SAM, alpha/beta horseshoe	Interproscan
IPR007934	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan
IPR036195	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR046952	Family	Glutathione reductase/thioredoxin reductase-like	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR012999	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR004099	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR043555	Family	Sushi repeat-containing protein SRPX-like	Interproscan
IPR003410	Domain	HYR domain	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12121	CARBON CATABOLITE REPRESSOR PROTEIN 4	Interproscan
PTHR43020	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1	Interproscan
PTHR42737	GLUTATHIONE REDUCTASE	Interproscan
PTHR47501	TRANSPOSASE-RELATED	Interproscan
PTHR46343	HYR DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45786	DNA BINDING PROTEIN-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0035596	Molecular Function	methylthiotransferase activity	Interproscan
GO:0035600	Biological Process	tRNA methylthiolation	Interproscan
GO:0006400	Biological Process	tRNA modification	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0046373	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan
GO:0004362	Molecular Function	glutathione-disulfide reductase (NADPH) activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006749	Biological Process	glutathione metabolic process	Interproscan
GO:0034599	Biological Process	cellular response to oxidative stress	Interproscan
GO:0045454	Biological Process	cell redox homeostasis	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016668	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16743	ASPM, ASP; abnormal spindle-like microcephaly-associated protein	-	Diabetic cardiomyopathy	ko05415	deepkoala
			Transfer RNA biogenesis	ko03016	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala