Gene detail

Detailed information of g5368.t1 in Tripedalia maipoensis

Genomic Location: scaffold_2:23173565...23195062
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004469 all species →	Family	Phosphoserine phosphatase	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR050582 all species →	Family	HAD-like hydrolase superfamily, SerB	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43344 all species →	PHOSPHOSERINE PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006564 all species →	Biological Process	L-serine biosynthetic process	Interproscan
GO:0036424 all species →	Molecular Function	L-phosphoserine phosphatase activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004647 all species →	Molecular Function	L-phosphoserine phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01079	serB, PSPH; phosphoserine phosphatase	EC:3.1.3.3	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.