Detailed information of g539.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002159721.2, mRNA decay activator protein ZFP36L2-B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7ZXW9mRNA decay activator protein ZFP36L2-A OS=Xenopus laevis OX=8355 GN=zfp36l2-A PE=1 SV=1
A4IIN5mRNA decay activator protein ZFP36L2 OS=Xenopus tropicalis OX=8364 GN=zfp36l2 PE=2 SV=2
Q805B4mRNA decay activator protein ZFP36L2-B OS=Xenopus laevis OX=8355 GN=zfp36l2-B PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04193PQ-loopPQ loop repeat RepeatInterproscan
PF17840TugsTethering Ubl4a to BAGS domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF01425AmidaseAmidaseFamilyInterproscan
PF20168PDS5Sister chromatid cohesion protein PDS5 proteinRepeatInterproscan
PF00211Guanylate_cycAdenylate and Guanylate cyclase catalytic domainDomainInterproscan
PF13191AAA_16AAA ATPase domainDomainInterproscan
PF04553Tis11B_NTis11B like protein, N terminusFamilyInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF03572Peptidase_S41Peptidase family S41FamilyInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006603RepeatPQ-loop repeatInterproscan
IPR005282FamilyLysosomal cystine transporterInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR008220FamilyHomoserine/serine acetyltransferase MetX-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR041421DomainUbl4, C-terminal TUGS domainInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR036928Homologous_superfamilyAmidase signature (AS) superfamilyInterproscan
IPR004412FamilyGlutamyl-tRNA(Gln) amidotransferase A subunitInterproscan
IPR020556Conserved_siteAmidase, conserved siteInterproscan
IPR023631DomainAmidase signature domainInterproscan
IPR000120FamilyAmidaseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR027640FamilyKinesin-like proteinInterproscan
IPR001054DomainAdenylyl cyclase class-3/4/guanylyl cyclaseInterproscan
IPR041664DomainOrc1-like, AAA ATPase domainInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR045877FamilyRNA-binding protein ZFP36-likeInterproscan
IPR007635DomainTis11B-like protein, N-terminalInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR004447FamilyC-terminal-processing peptidase S41AInterproscan
IPR005151DomainTail specific proteaseInterproscan
IPR041489DomainPDZ domain 6Interproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13131CYSTINOSINInterproscan
PTHR32268HOMOSERINE O-ACETYLTRANSFERASEInterproscan
PTHR46555UBIQUITIN-LIKE PROTEIN 4AInterproscan
PTHR11895TRANSAMIDASEInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR47969CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATEDInterproscan
PTHR16305TESTICULAR SOLUBLE ADENYLYL CYCLASEInterproscan
PTHR12547CCCH ZINC FINGER/TIS11-RELATEDInterproscan
PTHR32060TAIL-SPECIFIC PROTEASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0015184Molecular FunctionL-cystine transmembrane transporter activityInterproscan
GO:0015811Biological ProcessL-cystine transportInterproscan
GO:0004414Molecular Functionhomoserine O-acetyltransferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006535Biological Processcysteine biosynthetic process from serineInterproscan
GO:0009001Molecular Functionserine O-acetyltransferase activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0009092Biological Processhomoserine metabolic processInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0006620Biological Processpost-translational protein targeting to endoplasmic reticulum membraneInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0071816Biological Processtail-anchored membrane protein insertion into ER membraneInterproscan
GO:0071818Cellular ComponentBAT3 complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0030956Cellular Componentglutamyl-tRNA(Gln) amidotransferase complexInterproscan
GO:0050567Molecular Functionglutaminyl-tRNA synthase (glutamine-hydrolyzing) activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005875Cellular Componentmicrotubule associated complexInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0051231Biological Processspindle elongationInterproscan
GO:0004016Molecular Functionadenylate cyclase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009190Biological Processcyclic nucleotide biosynthetic processInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008236Molecular Functionserine-type peptidase activityInterproscan
GO:0004175Molecular Functionendopeptidase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12386CTNS; cystinosin-Mitochondrial biogenesisko03029deepkoala
DNA repair and recombination proteinsko03400deepkoala
Exosomeko04147deepkoala

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