Detailed information of g542.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_044162916.1, regulator of chromosome condensation-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P25183Regulator of chromosome condensation OS=Xenopus laevis OX=8355 GN=rcc1 PE=2 SV=1
P18754Regulator of chromosome condensation OS=Homo sapiens OX=9606 GN=RCC1 PE=1 SV=1
P23800Regulator of chromosome condensation OS=Mesocricetus auratus OX=10036 GN=RCC1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03062MBOATMBOAT, membrane-bound O-acyltransferase familyFamilyInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF03403PAF-AH_p_IIPlatelet-activating factor acetylhydrolase, isoform IIDomainInterproscan
PF01158Ribosomal_L36eRibosomal protein L36eFamilyInterproscan
PF13649Methyltransf_25Methyltransferase domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049941FamilyLysophospholipid acyltransferase 7/Porcupine-likeInterproscan
IPR004299FamilyMembrane bound O-acyl transferase, MBOATInterproscan
IPR003108DomainGAR domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR000509FamilyLarge ribosomal subunit protein eL36Interproscan
IPR038097Homologous_superfamilyLarge ribosomal subunit protein eL36 domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR025799FamilyProtein arginine N-methyltransferaseInterproscan
IPR041698DomainMethyltransferase domain 25Interproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR051553FamilyRan GTPase-activatingInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13906PORCUPINEInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR1011460S RIBOSOMAL PROTEIN L36Interproscan
PTHR11006PROTEIN ARGININE N-METHYLTRANSFERASEInterproscan
PTHR45982REGULATOR OF CHROMOSOME CONDENSATIONInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0017147Molecular FunctionWnt-protein bindingInterproscan
GO:0018345Biological Processprotein palmitoylationInterproscan
GO:0030258Biological Processlipid modificationInterproscan
GO:0061355Biological ProcessWnt protein secretionInterproscan
GO:1990698Molecular Functionpalmitoleoyltransferase activityInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016274Molecular Functionprotein-arginine N-methyltransferase activityInterproscan
GO:0018216Biological Processpeptidyl-arginine methylationInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02920RP-L36e, RPL36; large subunit ribosomal protein L36e-Chromosome and associated proteinsko03036deepkoala
Cytoskeleton proteinsko04812deepkoala
Chromosome and associated proteinsko03036deepkoala
Ribosomeko03011deepkoala

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