Gene detail

Detailed information of g5425.t1 in Montipora capitata

Genomic Location: Sc0000107:305228...310516
NR annotation: XP_029195821.2, sodium leak channel non-selective protein-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g5425.t1

atggaagcgaagggacaaccgcttgtcgtcgaatcagaccaccattcttcgtctacaacgttatggccccctcgacaattagcttatgctgaatctggggcaaccgacgatgaggaaaatgaagatttttctcccacttggtgggtcaaaacgtggtggtttcatcgactcgttcaagtctgcgcggttgtaagcttgatttccactgccatgaactcgccggagacttttaaaatatcgcatcctcttaaatacataaccctggtgctagacattgttgttgcggttgttttcactacggaaatggttgctcaaatcaaaatgtggggtctgtggaaaaaacagaaggcctatttacggcgatcgcagtgtgtttttgatgcgagtatgttgttttttatttttgtctccattgtgcttcaagtcgtcgagatttcaggtacttttggctacgattctttagctgagaaaagacatggctacgtgggtttttccattccgagggctcctcgagctcttattattatacggttttttagcgagcttattacaataagcctacctgaatcggtcgcgcgtagatgcaagcggcaaatctgggctgttacgctttttttgatgtattttatggcgtttggttctcttatcggagtgcagttattcggccgcaagaacttttactgcgtcaagaacacagctgatttaaaccacattcgatacaacgatattttgcttacagatcacctttgtaacaacaggaccggcgaagaaggttactattgtccccaagggtttaactgtgttcatattgacttcaataaaacaaatggcgcagacaaagactttttcagcaattttttcccaagtgttttaaccgtttacgaaagctctacacaagaaggctgggtgcttattatgtaccgcatgatggatttcaggtcacatgccttagtcattgtttactttgttttgctgatcttcttcgtagcatggcttgtgaagaacgtattcatcgctgttgtctcggaaaccttcgccgatattcgaagtctgtatatgtacagtcggaaatcctcgaagcgtacttcggctcggctcgcgtcccaagtcatcaaagacggaagcagaggatggcatttggtgtccgtcgaccacgaagccgtcaaaggtcacgcacctctgcgcattcgacaactcgtccactccgtctacttcaagtacacgatgtggttctttgttcttgtggacgccctactacaagcattgcttccatattcctctcgaaagtttgcgcaatttggcttcaccattatctttgacctagaagtcctgctcaaaattacgtgcatgggctttcgcccatatctcgtcagccggatgcatgtaacagagtttgttctggctgtgggaagtacagtgtgtgcgctcccgatactaatatccgagatagcagttttcctagcagtttttaacgtaatgagggttgtccgactagtcggtgccattccatcgctccaagaattttgtgagaaaattttcggcaccggcaagaagctgggtagcgccattatgtttacgttgttctttgtaatggtctcgtcggtaataagcatgcagttctttctgactttagaccctaaaaagttcggtacttttttgcgatcggtggagtccatgttccaaatcataacccaggaggggtgggtagaaatcttggatgaattgatcgtcaaaacgaagaatcctttcctggcaatcgttgtggctaccataattctcgctgtacatctgttttcttccttaatcatcatgagcgtctttgtggcggtgatcctggataatttagaactcgatgaagaagtcaagatcatgaaacagaagaaaatgggcggagaatcccgagactccactcaggcgcttccgatgcggctccgtgtcttcgagcgttttcgtgacgaccctcgattggtaaaaatgagtcggatcaaaacgacttcggattttttcaccccgaagatccgtgacagtttcatgaaaaaatttattgacaactctagtctggaactcccactgagtgaagattcgagacttcgggtcggggatgttgaaagtttaaggggaagaagacggacaactgtctcgatgaagcttctaaattcaacaatatccgaagtggataagatgtcaaagttcgtgcgaaaacagtcgagcatcactgcgttgattaacgattccaatcgccggcgtactttcgccttactttcaccaaccgaagtctccctaagaaacatgattgacgtgaacaagcaaacagccgcctcgacctcggttttccgatcagcctcgaggcgattccgaaaccgtcagcaaccgcagtcgtccccaaaggttactcctcaaggcagggtcaaacgaattactcaaattccaagtcaagcagcgagtgttcagctcagtcaagatgacagtaatatcggcaaagattttgatatccaatgggttcgtgtcaaacgtgaagaagctcagcgaaagcgaaaagcccaagaagagaaattgcgagaaaaccatccatattttgatcaacctcttttctcgttgcagcgtgactcgtggcttaggaggtttttacagggcatggtgaacgcacgctacataatcccaccaaggttcagagatcgcgcgtcccgcaatcacttcttaaccattgaacgactccagaaatgtttcgcgtcacaaacctacatggaatggatcatgattgttgttactttggtctcctgcatagctatgatgtttgagactccaaaagaacggactttcgttaattcttggacagaggtgatcgaatacctttttgttgtagcaatgagcattgaacttggtgtccgcattctggcaaatggtttgattttcacgccgaacgctgtgatccagaactttggtggcgtactagatgtattcatctacttcgtgtctcttgcatatgttgcttggcaaccacatccaataccagctcgatcaggggctcagttgttgatggtgttaaggtgccttcgtcccttacgtctcgtgactttggtccctaagatgaagcaagtcattctagagcttgttggcggatacaaagaaatccttaaagtcagcgcattacagctaatgctcatgttcatttttgccagctatggtgtccaagtgttctccggaaagtttggcagctgcaacgatcagcgcatgaaggacccaaaactctgcgtaggaactttcgaaatcgacattgccactcctcgcgggatccgggacttgcctggcacctcaaggataactgttccgcgggtatggacgaacccgagaaacttcgactttgatgacatcataagagcgtttttcgccttgtttgaagttctctcattggagggttggttggaagtacgcgatgtcatacaggcagtagtcgcgcccgcttatagtctctatgtccatatctatgtacttattggtagcatgattgggctaacgttgtttgtcggcgtgatcgtcatgaatttcaacgaacataaggggattgcgttactcacggttgatcagcgtcgttggcaagaccttaagaaacgtcttcgtctcgcgcaacctctgcatcttgctcgaagacctgacaccgaaggcatccgaacgttactctttgatgcaacgcaatctttaatttacaaacgcatcgtgattttcctggtggttatagattgcgcgacgcttacggtcatccagtggacttcagaggataagcccaaattgcgtaacgccctgacaagcgtcgctgccgtgtgctcgctgttgttcgtggtcgacatggtgctgaaactcatcgcattcacgtttcggggatactggcgaagcaggcgtaaccggtttgacctgctgctgacgagtcttggtgttctttgggtgaccctgaatttctctttgaaagggaccgaaacaccatattctggaagtactgtctttggaatggttattattctgtttcgttttctgacactttccggtaaacacgatacactaaagatgttgatgttgacagtagtgatgtcgctagtcaagagttttttcatcatcgctgttctggtagttctcatgttcagttatgccttagccggagtcatcttattcggaaccgtaaaatatggagaagtcttaaaccgtcacgcaaacttccaaacgagcttcaacgcaatgcttctgctcttccgtattacaaccggagaagactggaacaaagttatgcatgactgtatgttggttaaaccgtattgcacggagaatgccaatttctgggaaagtgattgcggatttcccgcagctgcgcgcatttatttcatgtcgttttacctgatcgttacgttcgtttttctaaatctttttatcgctgttatcattgagaacttttcgctcttctactctagtgatgaagattctcttatcagcaacactgatctgcgagattttcagctcacatggaacttagtagacaaaaaccgcaggggagttttaactgtgaggcaagcaaaactggtccttcgcttgctcaaaggtcgtttagaggtcgacagtagttcgttattgttcaagcacatgtgttgcgaaattgaaaagcttcgtaacggtggagaagtttcatttcatgacgtcatcggcgtacttgcctatcgttccgtcgacatcagccgaagtttacagttagaagaattgctggagcgagaggaattagagtatcaaatcgaagaggaagttgctattcagaccattcgtgattggttcgtaaatcttcgccggaaacgtgccgagcgggaatggatccgacacttagagcagggcggtatcccactagctggtggtgtgcagtttcacgaaaacaaaagcccggctgcttcgagcgtcgaaagcgttgagaattcagccagtgaggatcaagagcgtgaagatgaagctgagcgtgaagcccgtgaacacgatagcagtgaagacgacgatttttcagtctcttcgtcttcaaaagggccgtctattttgctctccgcaccgcctctaaggaagaaatcaggccgaagaggttcgcatggtggtaaaagttcggtaacgttccccgaggaactctcgggctcagagaaaagaaaaagttcgcctgatgtgtctggatctggcaagccggtgagaaagaggagcctttcagaggtgcatgagtttgcaggagacgtgcgtgattggtggactactcagataaatgaacaaccttaa

Transcript

g5425.t1

ATGGAAGCGAAGGGACAACCGCTTGTCGTCGAATCAGACCACCATTCTTCGTCTACAACGTTATGGCCCCCTCGACAATTAGCTTATGCTGAATCTGGGGCAACCGACGATgaggaaaatgaagatttttCTCCCACTTGGTGGGTCAAAACGTGGTGGTTTCATCGACTCGTTCAAGTCTGCGCGGTTGTAAGCTTGATTTCCACTGCCATGAACTCGCCGGAGACTTTTAAAATATCGCATCCTCTTAAATACATAACCCTGGTGCTAGACATTGTTGTTGCGGTTGTTTTCACTACGGAAATGGTTGCTCAAATCAAAATGTGGGGTCTGTGGAAAAAACAGAAGGCCTATTTACGGCGATCGCAGTGTGTTTTTGATGCGAGTatgttgttttttatttttgtctccATTGTGCTTCAAGTCGTCGAGATTTCAGGTACTTTTGGCTACGATTCTTTAGCTGAGAAAAGACATGGCTACGTGGGTTTTTCCATTCCGAGGGCTCCTCGAGCTCTTATTATTATACGGTTTTTTAGCGAGCTTATTACAATAAGCCTACCTGAATCGGTCGCGCGTAGATGCAAGCGGCAAATCTGGGCTGTTACGCTTTTTTTGATGTATTTTATGGCGTTTGGTTCTCTTATCGGAGTGCAGTTATTCGGCCGCAAGAACTTTTACTGCGTCAAGAACACAGCTGATTTAAACCACATTCGATACAACGATATTTTGCTTACAGATCACCTTTGTAACAACAGGACCGGCGAAGAAGGTTACTATTGTCCCCAAGGGTTTAACTGTGTTCATATTGACTTCAATAAAACAAATGGCGCAGACAAAGACTTTTTCAGCAATTTTTTCCCAAGTGTTTTAACCGTTTACGAAAGCTCTACACAAGAAGGCTGGGTGCTTATTATGTACCGCATGATGGATTTCAGGTCACATGCCTTAGTcattgtttactttgttttgctGATCTTCTTCGTAGCATGGCTTGTGAAGAACGTATTCATCGCTGTTGTCTCGGAAACCTTCGCCGATATTCGAAGTCTGTATATGTACAGTCGGAAATCCTCGAAGCGTACTTCGGCTCGGCTCGCGTCCCAAGTCATCAAAGACGGAAGCAGAGGATGGCATTTGGTGTCCGTCGACCACGAAGCCGTCAAAGGTCACGCACCTCTGCGCATTCGACAACTCGTCCACTCCGTCTACTTCAAGTACACGATGTGGTTCTTTGTTCTTGTGGACGCCCTACTACAAGCATTGCTTCCATATTCCTCTCGAAAGTTTGCGCAATTTGGCTTCACCATTATCTTTGACCTAGAAGTCCTGCTCAAAATTACGTGCATGGGCTTTCGCCCATATCTCGTCAGCCGGATGCATGTAACAGAGTTTGTTCTGGCTGTGGGAAGTACAGTGTGTGCGCTCCCGATACTAATATCCGAGATAGCAGTTTTCCTAGCAGTTTTTAACGTAATGAGGGTTGTCCGACTAGTCGGTGCCATTCCATCGCTCCAAGAATTTTGTGAGAAAATTTTCGGCACCGGCAAGAAGCTGGGTAGCGCCATTATGTTTACGTTGTTCTTTGTAATGGTCTCGTCGGTAATAAGCATGCAGTTCTTTCTGACTTTAGACCCTAAAAAGTTCGGTACTTTTTTGCGATCGGTGGAGTCCATGTTCCAAATCATAACCCAGGAGGGGTGGGTAGAAATCTTGGATGAATTGATCGTCAAAACGAAGAATCCTTTCCTGGCAATCGTTGTGGCTACCATAATTCTCGCTGTACATCTGTTTTCTTCCTTAATCATCATGAGCGTCTTTGTGGCGGTGATCCTGGATAATTTAGAACTCGATGAAGAAGTCAAGATCATGAAACAGAAGAAAATGGGCGGAGAATCCCGAGACTCCACTCAGGCGCTTCCGATGCGGCTCCGTGTCTTCGAGCGTTTTCGTGACGACCCTCGATTGGTAAAAATGAGTCGGATCAAAACGACTTCGGATTTTTTCACCCCGAAGATCCGTGACAGTTTCATGAAAAAATTTATTGACAACTCTAGTCTGGAACTCCCACTGAGTGAAGATTCGAGACTTCGGGTCGGGGATGTTGAAAGTTTAAGGGGAAGAAGACGGACAACTGTCTCGATGAAGCTTCTAAATTCAACAATATCCGAAGTGGATAAGATGTCAAAGTTCGTGCGAAAACAGTCGAGCATCACTGCGTTGATTAACGATTCCAATCGCCGGCGTACTTTCGCCTTACTTTCACCAACCGAAGTCTCCCTAAGAAACATGATTGACGTGAACAAGCAAACAGCCGCCTCGACCTCGGTTTTCCGATCAGCCTCGAGGCGATTCCGAAACCGTCAGCAACCGCAGTCGTCCCCAAAGGTTACTCCTCAAGGCAGGGTCAAACGAATTACTCAAATTCCAAGTCAAGCAGCGAGTGTTCAGCTCAGTCAAGATGACAGTAATATCGGCAAAGATTTTGATATCCAATGGGTTCGTGTCAAACGTGAAGAAGCTCAGCGAAAGCGAAAAGCCCAAGAAGAGAAATTGCGAGAAAACCATCCATATTTTGATCAACCTCTTTTCTCGTTGCAGCGTGACTCGTGGCTTAGGAGGTTTTTACAGGGCATGGTGAACGCACGCTACATAATCCCACCAAGGTTCAGAGATCGCGCGTCCCGCAATCACTTCTTAACCATTGAACGACTCCAGAAATGTTTCGCGTCACAAACCTACATGGAATGGATCATGATTGTTGTTACTTTGGTCTCCTGCATAGCTATGATGTTTGAGACTCCAAAAGAACGGACTTTCGTTAATTCTTGGACAGAGGTGATCGAATACCTTTTTGTTGTAGCAATGAGCATTGAACTTGGTGTCCGCATTCTGGCAAATGGTTTGATTTTCACGCCGAACGCTGTGATCCAGAACTTTGGTGGCGTACTAGATGTATTCATCTACTTCGTGTCTCTTGCATATGTTGCTTGGCAACCACATCCAATACCAGCTCGATCAGGGGCTCAGTTGTTGATGGTGTTAAGGTGCCTTCGTCCCTTACGTCTCGTGACTTTGGTCCCTAAGATGAAGCAAGTCATTCTAGAGCTTGTTGGCGGATACAAAGAAATCCTTAAAGTCAGCGCATTACAGCTAATGCTCATGTTCATTTTTGCCAGCTATGGTGTCCAAGTGTTCTCCGGAAAGTTTGGCAGCTGCAACGATCAGCGCATGAAGGACCCAAAACTCTGCGTAGGAACTTTCGAAATCGACATTGCCACTCCTCGCGGGATCCGGGACTTGCCTGGCACCTCAAGGATAACTGTTCCGCGGGTATGGACGAACCCGAGAAACTTCGACTTTGATGACATCATAAGAGCGTTTTTCGCCTTGTTTGAAGTTCTCTCATTGGAGGGTTGGTTGGAAGTACGCGATGTCATACAGGCAGTAGTCGCGCCCGCTTATAGTCTCTATGTCCATATCTATGTACTTATTGGTAGCATGATTGGGCTAACGTTGTTTGTCGGCGTGATCGTCATGAATTTCAACGAACATAAGGGGATTGCGTTACTCACGGTTGATCAGCGTCGTTGGCAAGACCTTAAGAAACGTCTTCGTCTCGCGCAACCTCTGCATCTTGCTCGAAGACCTGACACCGAAGGCATCCGAACGTTACTCTTTGATGCAACGCAATCTTTAATTTACAAACGCATCGTGATTTTCCTGGTGGTTATAGATTGCGCGACGCTTACGGTCATCCAGTGGACTTCAGAGGATAAGCCCAAATTGCGTAACGCCCTGACAAGCGTCGCTGCCGTGTGCTCGCTGTTGTTCGTGGTCGACATGGTGCTGAAACTCATCGCATTCACGTTTCGGGGATACTGGCGAAGCAGGCGTAACCGGTTTGACCTGCTGCTGACGAGTCTTGGTGTTCTTTGGGTGACCCTGAATTTCTCTTTGAAAGGGACCGAAACACCATATTCTGGAAGTACTGTCTTTGGAATGGTTATTATTCTGTTTCGTTTTCTGACACTTTCCGGTAAACACGATACACTAAAGATGTTGATGTTGACAGTAGTGATGTCGCTAGTCAAGAGTTTTTTCATCATCGCTGTTCTGGTAGTTCTCATGTTCAGTTATGCCTTAGCCGGAGTCATCTTATTCGGAACCGTAAAATATGGAGAAGTCTTAAACCGTCACGCAAACTTCCAAACGAGCTTCAACGCAATGCTTCTGCTCTTCCGTATTACAACCGGAGAAGACTGGAACAAAGTTATGCATGACTGTATGTTGGTTAAACCGTATTGCACGGAGAATGCCAATTTCTGGGAAAGTGATTGCGGATTTCCCGCAGCTGCGCGCATTTATTTCATGTCGTTTTACCTGATCGTTACGTTCGTTTTTCTAAATCTTTTTATCGCTGTTATCATTGAGAACTTTTCGCTCTTCTACTCTAGTGATGAAGATTCTCTTATCAGCAACACTGATCTGCGAGATTTTCAGCTCACATGGAACTTAGTAGACAAAAACCGCAGGGGAGTTTTAACTGTGAGGCAAGCAAAACTGGTCCTTCGCTTGCTCAAAGGTCGTTTAGAGGTCGACAGTAGTTCGTTATTGTTCAAGCACATGTGTTGCGAAATTGAAAAGCTTCGTAACGGTGGAGAAGTTTCATTTCATGACGTCATCGGCGTACTTGCCTATCGTTCCGTCGACATCAGCCGAAGTTTACAGTTAGAAGAATTGCTGGAGCGAGAGGAATTAGAGTATCAAATCGAAGAGGAAGTTGCTATTCAGACCATTCGTGATTGGTTCGTAAATCTTCGCCGGAAACGTGCCGAGCGGGAATGGATCCGACACTTAGAGCAGGGCGGTATCCCACTAGCTGGTGGTGTGCAGTTTCACGAAAACAAAAGCCCGGCTGCTTCGAGCGTCGAAAGCGTTGAGAATTCAGCCAGTGAGGATCAAGAGCGTGAAGATGAAGCTGAGCGTGAAGCCCGTGAACACGATAGCAGTGAAGACGACGATTTTTCAGTCTCTTCGTCTTCAAAAGGGCCGTCTATTTTGCTCTCCGCACCGCCTCTAAGGAAGAAATCAGGCCGAAGAGGTTCGCATGGTGGTAAAAGTTCGGTAACGTTCCCCGAGGAACTCTCGGGCtcagagaaaagaaaaagttcgCCTGATGTGTCTGGATCTGGCAAGCCGGTGAGAAAGAGGAGCCTTTCAGAGGTGCATGAGTTTGCAGGAGACGTGCGTGATTGGTGGACTACTCAGATAAATGAACAACCTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZF0	Sodium leak channel NALCN OS=Homo sapiens OX=9606 GN=NALCN PE=1 SV=1
Q8BXR5	Sodium leak channel NALCN OS=Mus musculus OX=10090 GN=Nalcn PE=1 SV=2
Q6Q760	Sodium leak channel NALCN OS=Rattus norvegicus OX=10116 GN=Nalcn PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007069 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028823 all species →	Family	Sodium leak channel NALCN	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46141 all species →	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032224 all species →	Biological Process	positive regulation of synaptic transmission, cholinergic	Interproscan
GO:0032230 all species →	Biological Process	positive regulation of synaptic transmission, GABAergic	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21863	NALCN; sodium leak channel non-selective protein	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g5425.t1 across 48 RNA-seq samples of Montipora capitata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

3Conditions

23.4Max TPM

10.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole organisms · ambient pH treatment	21	21	11.36	23.40
whole organisms · low pH treatment	15	15	9.85	14.03
whole organisms · extra low pH treatment pH treatment	12	12	10.81	19.04

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR11452228	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	23.40
SRR11452230	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	22.19
SRR11452222	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	19.55
SRR11452234	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	16.56
SRR11452233	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	14.57
SRR11452242	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	14.11
SRR11452232	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	13.97
SRR11452259	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	13.30
SRR11452252	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	12.62
SRR11452250	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	12.47
SRR11452246	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	12.23
SRR11452243	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	10.78
SRR11452237	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	10.25
SRR11452231	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	10.17
SRR11452254	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	10.01
SRR11452260	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	8.28
SRR11452262	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	3.90
SRR11452251	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	3.19
SRR11452217	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	2.91
SRR11452240	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	2.33
SRR11452263	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	1.81
SRR11452241	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	14.03
SRR11452224	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	13.88
SRR11452249	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	12.90
SRR11452223	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	12.57
SRR11452247	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	11.83
SRR11452236	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	11.65
SRR11452245	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	11.62
SRR11452221	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	11.50
SRR11452258	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	11.33
SRR11452253	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	10.35
SRR11452238	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	10.25
SRR11452255	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	6.39
SRR11452218	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	3.94
SRR11452229	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	3.36
SRR11452216	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	2.17
SRR11452225	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	19.04
SRR11452227	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	18.54
SRR11452226	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	17.28
SRR11452239	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	13.88
SRR11452248	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	13.01
SRR11452235	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	12.69
SRR11452244	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	11.27
SRR11452256	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	9.26
SRR11452257	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	9.22
SRR11452219	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	3.13
SRR11452261	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	1.79
SRR11452220	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	0.65

Source: CnidoSite RNA-seq expression matrices (MCAPI_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.