Detailed information of g5426.t1 in Acropora digitifera

Genomic Location: chr3Alt:3091766...3094295
NR annotation: XP_044168838.1, retinol dehydrogenase 7-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K3P0Short-chain dehydrogenase/reductase family 9C member 7 OS=Mus musculus OX=10090 GN=Sdr9c7 PE=2 SV=1
O88451Retinol dehydrogenase 7 OS=Mus musculus OX=10090 GN=Rdh7 PE=1 SV=1
P55006Retinol dehydrogenase 7 OS=Rattus norvegicus OX=10116 GN=Rdh7 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43313
all species →		SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008202
all species →		Biological Processsteroid metabolic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11154RDH16; retinol dehydrogenase 16EC:1.1.1.-
Retinol metabolismko00830deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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