Gene detail

Detailed information of g5429.t1 in Acropora digitifera

Genomic Location: chr3Alt:3109104...3122115
NR annotation: XP_029191623.1, G protein-coupled receptor kinase 5-like isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr3Alt.g5429.t1

GGTTGACCAATCACAGGCGTCGGTTTTGTTTCGGTCCATGACAGCCATATTACTGTGGGTGGTTTCATGTGAATCTTCCACATTTGTTTCCTATGATTAAGTCCGAGTTATGGAACTAGAGAATATTGTAGCCAACACTGTATATTTAAAAGCACGAGAAAGTAAAACTAAGGGAAGAAGCAAGAAGTGGAAGGAGCTTTTAAAGTTTCCGCATCACACCGTATCCGCTTATTTGAAACACGAATTGCAGCCTACTTACGACAGAATTTGCGAGAAAGAGCCCATTGGACGTGAGCTATTCCGACAATTTTGCGCTGGAAATGCAGAACTTCAGCGAGCCATCTATTTTCTTGACGAAGTGGACGTATTTGACAAAGCCGAGGCGTCGAGGAAGCCCTCGCTGGCCAGAGATCTCGTTCAGAAACATCTTCCAGAACAGAACACGCACAATCATGAAGTATTGTTGGGTGGCGAGAGGTATGACGGCCACCGAGTGGCTGGTGTCATGGACGACACAGTAGAGAAGACAATACGAACAGTGTCAAAAGCTCCTGATGAGGAATTTTCGATGGATTTCTTTAAGGATGCTGTCAGGGAAGTAAAAGATTTTCTAGGAGGGAAGCCTTTTGAAGATTACCAACAAACAATGTACTTTTCCAGATATTTGCAGTGGAAGTGGCTTGAAAGACAACCTGTCACAAAGAAGACATTTCGCCATTACAGAGTTTTAGGAAAAGGAGGATTTGGGGAGGTTTGTGCTTGTCAAAGCAAAATTAGCGGAAAGATGTATGCCATGAAAAAACTGGAGAAGAAGAGAATTAAGAGGAGAAAAGGAGAGGCAATGGCATTAAATGAGAAACAACTTTTAGAAAAAATTGACAGCAGATTTGTGGTCAGTTTAGCGTACGCATATGAAACCAAAGATGCACTCTGTATGGTTTTAACATTAATGAATGGTGGTGATTTGAAGTTTCACATCCACAACATGGGAAACCCTGGTTTTGAAGAAGAAAGGGCAGTTTTCTATGCTGCAGAAGTCATGTTAGGATTAATTCATTTACACTCAAAAAGAATAGTTTACAGAGATATGAAACCAGAAAATCTTCTTTTAGATGACAATGGTCACGTTCGCATCTCTGATCTTGGTTTAGCTGTTCAAATAAAAAATGGCGAAACAATAAGAGGAAGAGTGGGGACAATCGGCTACATGTCCCCTGAGGTGGTAAAAAATGAACGTTATACATTTGCCCCAGACTGGTGGGGTCTAGGTTGTCTTGTATATGAGATGATTCAAGGCAAGTCTCCATTTAGAGCAAGAAAGGAAAAAGTGAAAAGGGAAGAAGTGGAACGGAGAGTTAAAGAAGACCAGGAAGTGTACACAGACAAGTTCAGTTCAGCAGCAAGATTAATATGTAGTCAGGCCCTTCAAAAAGATGTAAATAACAGATTAGGATATAGCGATTTAGGTGGAGAGGAGGCTAAGAAACATGTCTTCTTTAGAAATATTAACTGGCCACAGCTGGAAGCAGGAATGTTCAAGCCTCCATTTGTTCCTGATCCAAGAGCTGTGTATTGCAAAGATGTGCTTGACATTGAGCAGTTCTCTTCTGTGAAGGGTGTGAGGTTGGATGAAAGCGATGATGAATTTTATAGGAAATTTGCCAGTGGATCTGTGTCAATACCCTGGCAGTCTGAGATGATCGAGATGGAGTGTTTTTCAGAGTTGAATGTTTTCGGTCCTCATGGTACTCCAACACCTGATCTCATTGGGGATGCACCACCGGAACCTCCAAAGAAAAGAGGGATGGCATGCTGTTCAGGATCTGATGATGGTCTTTAACAGTAAGTAAGAAGAGGAGACTTCTTTGTACAGAAAAAAGGTTATAAAAAATATTATTTCCAAATTGACTGGAAAAGTGTGACCATTATTATCAACATGAGTTGGTCCTTAGAGTGTACAGAAAAGTTAAGCGCCTCGTGGGACGTAGTGTAATGACAAAAGTTCTAATTCTTTTTATATTTTATCCGTGAGTATGGCAAGCCAATTGATGATTGGCCTTGTAGTAACACAAAGTGATTTGATGTTTTTAAAATTTATTGATGACAGTTTTGGCGGTCTTTTGTAAGATGCTAACTGTAGCCAAGTAAAATCAACTCAAAGTGGACCCACATTAGCCAATGATAGTCTTCATTTGAATTTGAACCGAGTCTGCAAGGCTCAATAAAGGTATTTCACCTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P43249	G protein-coupled receptor kinase 5 OS=Bos taurus OX=9913 GN=GRK5 PE=1 SV=1
Q8VEB1	G protein-coupled receptor kinase 5 OS=Mus musculus OX=10090 GN=Grk5 PE=1 SV=2
P34947	G protein-coupled receptor kinase 5 OS=Homo sapiens OX=9606 GN=GRK5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00615 all species →	RGS	Regulator of G protein signaling domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR000239 all species →	Family	GPCR kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24355 all species →	G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0009966 all species →	Biological Process	regulation of signal transduction	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004703 all species →	Molecular Function	G protein-coupled receptor kinase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08291	GRK4_5_6; G protein-coupled receptor kinase	EC:2.7.11.16	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.