Gene detail

Detailed information of g543.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ8321901.1, hypothetical protein KUTeg_000372 [Tegillarca granosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9UL18	Protein argonaute-1 OS=Homo sapiens OX=9606 GN=AGO1 PE=1 SV=3
Q8CJG1	Protein argonaute-1 OS=Mus musculus OX=10090 GN=Ago1 PE=1 SV=2
O77503	Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=AGO2 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	Fork_head

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15797	DUF4706	Domain of unknown function (DUF4706)	Family	Interproscan
PF16486	ArgoN	N-terminal domain of argonaute	Domain	Interproscan
PF08699	ArgoL1	Argonaute linker 1 domain	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00264	Tyrosinase	Common central domain of tyrosinase	Domain	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF01180	DHO_dh	Dihydroorotate dehydrogenase	Domain	Interproscan
PF05875	Ceramidase	Ceramidase	Family	Interproscan
PF04379	DUF525	ApaG domain	Family	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00250	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031600	Domain	Domain of unknown function DUF4706	Interproscan
IPR036085	Homologous_superfamily	PAZ domain superfamily	Interproscan
IPR014811	Domain	Argonaute, linker 1 domain	Interproscan
IPR032474	Domain	Protein argonaute, N-terminal	Interproscan
IPR002227	Domain	Tyrosinase copper-binding domain	Interproscan
IPR008922	Homologous_superfamily	Di-copper centre-containing domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050316	Family	Tyrosinase and Hemocyanin	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050569	Family	Trace Amine-Associated Receptor	Interproscan
IPR005719	Family	Dihydroorotate dehydrogenase, class 2	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR005720	Domain	Dihydroorotate dehydrogenase, catalytic	Interproscan
IPR050074	Family	Dihydroorotate dehydrogenase	Interproscan
IPR001295	Conserved_site	Dihydroorotate dehydrogenase, conserved site	Interproscan
IPR008901	Family	Alkaline ceramidase	Interproscan
IPR036767	Homologous_superfamily	ApaG domain superfamily	Interproscan
IPR007474	Domain	ApaG domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001766	Domain	Fork head domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22891	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	Interproscan
PTHR11474	TYROSINASE FAMILY MEMBER	Interproscan
PTHR24249	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan
PTHR48109	DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED	Interproscan
PTHR46139	ALKALINE CERAMIDASE	Interproscan
PTHR14289	F-BOX ONLY PROTEIN 3	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003727	Molecular Function	single-stranded RNA binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0016246	Biological Process	regulatory ncRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0035198	Molecular Function	miRNA binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004152	Molecular Function	dihydroorotate dehydrogenase activity	Interproscan
GO:0006207	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0009220	Biological Process	pyrimidine ribonucleotide biosynthetic process	Interproscan
GO:0006672	Biological Process	ceramide metabolic process	Interproscan
GO:0016811	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	Interproscan
GO:0046514	Biological Process	ceramide catabolic process	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0042645	Cellular Component	mitochondrial nucleoid	Interproscan
GO:0070987	Biological Process	error-free translesion synthesis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17809	POLDIP2; polymerase delta-interacting protein 2	-	Mitochondrial biogenesis	ko03029	deepkoala